RNA–Protein interactions for RNA: ENST00000383836.7

SRGAP3-202, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP3, Length 8,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-202ENST00000383836 RAI1Q7Z5J4 1906 aaPredicted RBP10.12□□□□□ -0.79
SRGAP3-202ENST00000383836 SAP25Q8TEE9 199 aa10.12□□□□□ -0.79
SRGAP3-202ENST00000383836 TFF1P04155 84 aa10.12□□□□□ -0.79
SRGAP3-202ENST00000383836 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
SRGAP3-202ENST00000383836 DEFB125Q8N687 156 aa10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 RPL36AP83881 106 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 RPL36ALQ969Q0 106 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 SRSF8Q9BRL6 282 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 MRPL14Q6P1L8 145 aaKnown RBP10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 LINC00473A8K010 186 aa10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 TRBV7-1A0A0A6YYK4 115 aa10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 HAPLN4Q86UW8 402 aa10.11□□□□□ -0.79
SRGAP3-202ENST00000383836 C12orf74Q32Q52 190 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 COLCA1Q6ZS62 124 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 A0A1W2PRX2 142 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 TIMM23O14925 209 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 AMTNQ6UX39 209 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 C1orf159Q96HA4 380 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 ACYP1P07311 99 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 CD24P25063 80 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 FAM168AQ92567 244 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 CRYBA4P53673 196 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 FAM231DQ6ZW35 169 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 TRPT1Q86TN4 253 aaKnown RBP10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 PNRC2Q9NPJ4 139 aaKnown RBP10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 ANAPC10Q9UM13 185 aa10.1□□□□□ -0.79
SRGAP3-202ENST00000383836 PRR19A6NJB7 356 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 HLA-DRB4P13762 266 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 HLA-DRB4X5D2U9 266 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 TEX48A0A1B0GUV7 120 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 RPL32P62910 135 aaKnown RBP10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 A0A0G2JRQ6 117 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 MRPL51Q4U2R6 128 aaKnown RBP10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 TMEM213A2RRL7 107 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 H0YJW9 148 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 PRB3Q04118 309 aaPredicted RBP10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 SIGLEC8Q9NYZ4 499 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 C10orf55Q5SWW7 151 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 LRP4O75096 1905 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 F8VRH5 84 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 C2orf66Q6UXQ4 117 aa10.09□□□□□ -0.79
SRGAP3-202ENST00000383836 Q6ZRM9 215 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 SPAARA0A1B0GVQ0 90 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 FAM27E3Q08E93 113 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 RNASE8Q8TDE3 154 aaKnown RBP10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 A0A087WWL8 130 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 HAMPP81172 84 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 TCTEX1D4Q5JR98 221 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 WNT2P09544 360 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 NPYP01303 97 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 SRRM5B3KS81 715 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 SYNJ2BPP57105 145 aa10.08□□□□□ -0.8
SRGAP3-202ENST00000383836 PSPNO60542 156 aa10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 RNASE2P10153 161 aaKnown RBP10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 C8orf49Q96NF6 230 aa10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 MRPL35Q9NZE8 188 aaKnown RBP10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 A0A087WX48 190 aa10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 LINC01560Q8TB33 94 aa10.07□□□□□ -0.8
SRGAP3-202ENST00000383836 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 C3orf56Q8N813 242 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 RNF5Q99942 180 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 PIEZO1Q92508 2521 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 Q6P435 159 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 SHANK2-AS3Q9BTD1 123 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 SS18Q15532 418 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 I3L3M4 83 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 FOXI2Q6ZQN5 318 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 IGHV1-3A0A0C4DH29 117 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 TMEM200BQ69YZ2 307 aa10.06□□□□□ -0.8
SRGAP3-202ENST00000383836 KLF5Q13887 457 aaPredicted RBP10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 Q6ZVH6 145 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 ZCCHC24Q8N2G6 241 aaKnown RBP10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 TMEM14BQ9NUH8 114 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 METRNQ9UJH8 293 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 IGHG3P01860 377 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 TRGV1A0A0A0MS02 117 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 LYPD6BQ8NI32 183 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 TRAV12-1A0A0B4J245 112 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 SPACA3Q8IXA5 215 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 ATOX1O00244 68 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 IGHV1-8P0DP01 117 aa10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 NTN5Q8WTR8 489 aaPredicted RBP10.05□□□□□ -0.8
SRGAP3-202ENST00000383836 SAP30O75446 220 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 ATP1A1-AS1Q5TC04 95 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 FOXG1P55316 489 aaPredicted RBP10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 G3V4G9 280 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 LHBP01229 141 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 VWC2Q2TAL6 325 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 ANXA2RQ3ZCQ2 193 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 C20orf204Q6ZNR8 217 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 SH2D6Q7Z4S9 175 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 NDPQ00604 133 aa10.04□□□□□ -0.8
SRGAP3-202ENST00000383836 COA6Q5JTJ3 125 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms