RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 NDUFA3O95167 84 aa11.71□□□□□ -0.53
CTNS-202ENST00000381870 CCL11P51671 97 aa11.71□□□□□ -0.53
CTNS-202ENST00000381870 LYPD1Q8N2G4 141 aa11.71□□□□□ -0.53
CTNS-202ENST00000381870 NXT2Q9NPJ8 142 aaKnown RBP11.71□□□□□ -0.53
CTNS-202ENST00000381870 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
CTNS-202ENST00000381870 Q8TAT8 98 aa11.71□□□□□ -0.53
CTNS-202ENST00000381870 TEX22C9J3V5 150 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 I3L2K1 104 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 IGLC6P0CF74 106 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 GLRXP35754 106 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 PROCRQ9UNN8 238 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 RIF1Q5UIP0 2472 aaKnown RBP11.7□□□□□ -0.54
CTNS-202ENST00000381870 OR11H12B2RN74 326 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 HOXA3O43365 443 aaPredicted RBP11.7□□□□□ -0.54
CTNS-202ENST00000381870 OR11H1Q8NG94 326 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 OR11H2Q8NH07 326 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 ATP6V0E2Q8NHE4 81 aa11.7□□□□□ -0.54
CTNS-202ENST00000381870 COL27A1Q8IZC6 1860 aaPredicted RBP11.7□□□□□ -0.54
CTNS-202ENST00000381870 IGLV3-9A0A075B6K5 115 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 RPEQ96AT9 228 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 CARD19Q96LW7 228 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 PLCE1Q9P212 2302 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 IL4P05112 153 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 PSMB2P49721 201 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 PRR25Q96S07 402 aa11.69□□□□□ -0.54
CTNS-202ENST00000381870 NCBP2LA6PVI3 153 aaKnown RBP11.68□□□□□ -0.54
CTNS-202ENST00000381870 CCL8P80075 99 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 PRB3Q04118 309 aaPredicted RBP11.68□□□□□ -0.54
CTNS-202ENST00000381870 TEX36Q5VZQ5 186 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 ZFP2Q6ZN57 461 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 ZNF491Q8N8L2 437 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 AAMDCQ9H7C9 122 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 KALRNO60229 2985 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 MUC6Q6W4X9 2439 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 CEACAM4O75871 244 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 DLX4Q92988 240 aaPredicted RBP11.68□□□□□ -0.54
CTNS-202ENST00000381870 S4R3C0 116 aa11.68□□□□□ -0.54
CTNS-202ENST00000381870 IGLV2-18A0A075B6J9 118 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 PRSS29PA6NIE9 313 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 WT1P19544 449 aaPredicted RBP11.67□□□□□ -0.54
CTNS-202ENST00000381870 DLX1P56177 255 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 RNF125Q96EQ8 232 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 ANAPC13Q9BS18 74 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 CTSZQ9UBR2 303 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 A0A087WX48 190 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 LOC107984156A0A0G2JMH3 177 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 ORM1P02763 201 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 CRYGBP07316 175 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 EFNA4P52798 201 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 ARL17AQ8IVW1 177 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 Q8N8P6 123 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 MYOZ3Q8TDC0 251 aa11.67□□□□□ -0.54
CTNS-202ENST00000381870 MYMXA0A1B0GTQ4 84 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 LINC01549A6NIU2 74 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 IGFL4Q6B9Z1 124 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 Q6ZS92 163 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 CACNA1GO43497 2377 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 LAMA5O15230 3695 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 LINC01559Q495D7 138 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 DTX2Q86UW9 622 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 LINC00311Q8N616 119 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 ZZEF1O43149 2961 aa11.66□□□□□ -0.54
CTNS-202ENST00000381870 PTPRZ1P23471 2315 aaPredicted RBP11.66□□□□□ -0.54
CTNS-202ENST00000381870 IGHG3P01860 377 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 PLGLAQ15195 96 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 PSMG3-AS1Q96PY0 264 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 FBXL15Q9H469 300 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 K7EIM0 57 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 PPP1R27Q86WC6 154 aa11.65□□□□□ -0.54
CTNS-202ENST00000381870 TRAV26-2A0A0B4J265 109 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 B5MCH6 92 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 LGALS1P09382 135 aaKnown RBP11.64□□□□□ -0.55
CTNS-202ENST00000381870 TCF15Q12870 199 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 LYPD2Q6UXB3 125 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 COX8CQ7Z4L0 72 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 TMEM190Q8WZ59 177 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 FAM90A27PA6NNH2 459 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 PLNP26678 52 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 HLA-DMBP28068 263 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 CFAP161Q6P656 301 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 PPDPFLQ8WWR9 84 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 KIR2DL4Q99706 377 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 RALYQ9UKM9 306 aaKnown RBP11.64□□□□□ -0.55
CTNS-202ENST00000381870 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
CTNS-202ENST00000381870 TRGV3P03979 118 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 GAGE5Q13069 117 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 GAGE6Q13070 117 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 LAGE3Q14657 143 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 CNFNQ9BYD5 112 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 LINC01619G3V211 115 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 CD40P25942 277 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 PDE6HQ13956 83 aa11.63□□□□□ -0.55
CTNS-202ENST00000381870 TEN1Q86WV5 123 aa11.62□□□□□ -0.55
CTNS-202ENST00000381870 PRSS33Q8NF86 280 aa11.62□□□□□ -0.55
CTNS-202ENST00000381870 SRSF8Q9BRL6 282 aaKnown RBP11.62□□□□□ -0.55
CTNS-202ENST00000381870 ZNF292O60281 2723 aa11.62□□□□□ -0.55
CTNS-202ENST00000381870 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
CTNS-202ENST00000381870 C8orf31Q8N9H6 132 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms