RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 KRTAP27-1Q3LI81 207 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 GFRA4Q9GZZ7 299 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 PIP4P1Q86T03 277 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 COPS9Q8WXC6 57 aa13.67□□□□□ -0.22
SGCB-201ENST00000381431 FAM104BQ5XKR9 115 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 PRSS57Q6UWY2 283 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 UBE2E1P51965 193 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 FAM231DQ6ZW35 169 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 NAV3Q8IVL0 2385 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 SYNJ2BPP57105 145 aa13.66□□□□□ -0.22
SGCB-201ENST00000381431 TRGV11A0A075B6L2 103 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 IGHV4-39P01824 125 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 IGLL1P15814 213 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 IL17RELQ6ZVW7 336 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 PRR25Q96S07 402 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 UNQ6494/PRO21346Q6UXR6 183 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 USP9XQ93008 2570 aaPredicted RBP13.65□□□□□ -0.22
SGCB-201ENST00000381431 IGLC7A0M8Q6 106 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 FAM231BA6NCW3 169 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 CT83Q5H943 113 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 HIVEP2P31629 2446 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 TMEM75Q8N9X5 138 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 USMG5Q96IX5 58 aa13.65□□□□□ -0.22
SGCB-201ENST00000381431 UBE2V1Q13404 147 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 KIR3DS1Q14943 382 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 ZC2HC1AQ96GY0 325 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 TRAV8-2A0A0B4J237 113 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 SMIM27A0A1W2PRY6 76 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
SGCB-201ENST00000381431 USP9YO00507 2555 aaPredicted RBP13.64□□□□□ -0.23
SGCB-201ENST00000381431 VWC2Q2TAL6 325 aa13.64□□□□□ -0.23
SGCB-201ENST00000381431 FAM110DQ8TAY7 271 aaPredicted RBP13.64□□□□□ -0.23
SGCB-201ENST00000381431 TRBV7-9A0A0J9YWB2 115 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 PLNP26678 52 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 PLA2G5P39877 138 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 NPC2P61916 151 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 MORN5Q5VZ52 161 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 OR5A1Q8NGJ0 315 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 TMEM190Q8WZ59 177 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 TRGV4A0A0C4DH28 118 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 IGHV3-53P01767 116 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 KAAG1Q9UBP8 84 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 VCYO14598 125 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 LCNL1Q6ZST4 164 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 ZNF491Q8N8L2 437 aa13.63□□□□□ -0.23
SGCB-201ENST00000381431 TDGF1P13385 188 aa13.62□□□□□ -0.23
SGCB-201ENST00000381431 HLA-DMBP28068 263 aa13.62□□□□□ -0.23
SGCB-201ENST00000381431 UBE2E2Q96LR5 201 aa13.62□□□□□ -0.23
SGCB-201ENST00000381431 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
SGCB-201ENST00000381431 MRPL51Q4U2R6 128 aaKnown RBP13.62□□□□□ -0.23
SGCB-201ENST00000381431 VGLL1Q99990 258 aa13.62□□□□□ -0.23
SGCB-201ENST00000381431 KNCNA6PVL3 124 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 GAGE13Q4V321 117 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 IGHV1-24A0A0C4DH33 117 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 NUPR1O60356 82 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 THAP8Q8NA92 274 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 LHBP01229 141 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 CHCHD5Q9BSY4 110 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 H3BRN7 92 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 MAJINQ3KP22 176 aa13.61□□□□□ -0.23
SGCB-201ENST00000381431 TRAV26-2A0A0B4J265 109 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 MSMPQ1L6U9 139 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 LURAP1LQ8IV03 231 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 COX11Q9Y6N1 276 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 C8orf86Q6ZUL3 223 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 PYGO2Q9BRQ0 406 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 TRGV1A0A0A0MS02 117 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 PRSS46E5RG02 174 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 Q6ZPA2 131 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 SPRY4Q9C004 299 aa13.6□□□□□ -0.23
SGCB-201ENST00000381431 GAGE12BA1L429 117 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 SHISA9B4DS77 424 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 MSMBP08118 114 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 DEFB131AP59861 70 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 CD5LO43866 347 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 IGLV2-14P01704 120 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 LAMA3Q16787 3333 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 NPSP0C0P6 89 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 PAX2Q02962 417 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 TSPAN13O95857 204 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 IGFL2Q6UWQ7 119 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 PRSS33Q8NF86 280 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 PHLDA1Q8WV24 401 aaPredicted RBP13.59□□□□□ -0.23
SGCB-201ENST00000381431 RITA1Q96K30 269 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 CHAC1Q9BUX1 264 aa13.59□□□□□ -0.23
SGCB-201ENST00000381431 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 IGHV2-70DA0A0C4DH43 119 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 NPYP01303 97 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 IGHV1-69P01742 117 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 SIGLEC8Q9NYZ4 499 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 TMEM14CQ9P0S9 112 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 ERG28Q9UKR5 140 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 ALPK3Q96L96 1907 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
SGCB-201ENST00000381431 RNF223E7ERA6 249 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms