RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 C3orf36Q3SXR2 165 aa7.41□□□□□ -1.22
PTPRA-204ENST00000380393 OXTP01178 125 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 CRYGSP22914 178 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 CRIP2P52943 208 aaPredicted RBP7.4□□□□□ -1.22
PTPRA-204ENST00000380393 ZNF329Q86UD4 541 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 FOXB1Q99853 325 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 RTL8AQ9BWD3 113 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 hADV29S1A0JD25 119 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 TRACP01848 142 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 CD59P13987 128 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 PLA2G2CQ5R387 149 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.22
PTPRA-204ENST00000380393 PYYP10082 97 aa7.4□□□□□ -1.23
PTPRA-204ENST00000380393 MYCNOSP40205 109 aa7.4□□□□□ -1.23
PTPRA-204ENST00000380393 C10orf128Q5T292 105 aa7.4□□□□□ -1.23
PTPRA-204ENST00000380393 COL5A1P20908 1838 aaPredicted RBP7.4□□□□□ -1.23
PTPRA-204ENST00000380393 DEFB108AA8MXU0 73 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 TIMM8AO60220 97 aaPredicted RBP7.39□□□□□ -1.23
PTPRA-204ENST00000380393 GFRA3O60609 400 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 MDP1Q86V88 176 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 ZNF492Q9P255 531 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 NBEAQ8NFP9 2946 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 C19orf71A6NCJ1 209 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 NPIPB11E5RHQ5 1161 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 CXCL13O43927 109 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 IGHV3-13P01766 116 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 UBE2D1P51668 147 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 SLC25A48Q6ZT89 311 aaKnown RBP7.39□□□□□ -1.23
PTPRA-204ENST00000380393 LINC00336Q6ZUF6 198 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 POM121L12Q8N7R1 296 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 ITLN1Q8WWA0 313 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 SRXN1Q9BYN0 137 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 IGHV3-43A0A0B4J1X8 118 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 SRRM4A7MD48 611 aaKnown RBP7.39□□□□□ -1.23
PTPRA-204ENST00000380393 LGALS9O00182 355 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 MRPS12O15235 138 aaKnown RBP7.39□□□□□ -1.23
PTPRA-204ENST00000380393 IGHV3-43DP0DP04 118 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 COX7CP15954 63 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 PYGO1Q9Y3Y4 419 aa7.39□□□□□ -1.23
PTPRA-204ENST00000380393 H3BMM0 161 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 CNTFRP26992 372 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 ORMDL3Q8N138 153 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 UBE2WQ96B02 151 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 NXT2Q9NPJ8 142 aaKnown RBP7.38□□□□□ -1.23
PTPRA-204ENST00000380393 NGFP01138 241 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 HERVK_113P61574 105 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 C11orf53Q8IXP5 236 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 SVILO95425 2214 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 TRBV6-6A0A0A6YYG2 114 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 LINC01619G3V211 115 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 LGALS1P09382 135 aaKnown RBP7.38□□□□□ -1.23
PTPRA-204ENST00000380393 CCL3P10147 92 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 EXOC3-AS1Q8N2X6 119 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 TMEM86BQ8N661 226 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 DEFB124Q8NES8 71 aa7.38□□□□□ -1.23
PTPRA-204ENST00000380393 MRPL20Q9BYC9 149 aaKnown RBP7.38□□□□□ -1.23
PTPRA-204ENST00000380393 MRPL35Q9NZE8 188 aaKnown RBP7.38□□□□□ -1.23
PTPRA-204ENST00000380393 CHD8Q9HCK8 2581 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 FAM236DA0A1B0GTK5 79 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 A0A1W2PRX2 142 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 FAM236CP0DP71 79 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 CRYGAP11844 174 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 LEPP41159 167 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 BRWD1-AS2P59051 145 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 MORN5Q5VZ52 161 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 SCGB1D4Q6XE38 83 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 PAXXQ9BUH6 204 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 FGF23Q9GZV9 251 aaPredicted RBP7.37□□□□□ -1.23
PTPRA-204ENST00000380393 A0A1W2PNU3 283 aaPredicted RBP7.37□□□□□ -1.23
PTPRA-204ENST00000380393 SCRG1O75711 98 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 NDUFA11Q86Y39 141 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 RNF152Q8N8N0 203 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 NFAM1Q8NET5 270 aaPredicted RBP7.37□□□□□ -1.23
PTPRA-204ENST00000380393 SRSF12Q8WXF0 261 aaKnown RBP7.37□□□□□ -1.23
PTPRA-204ENST00000380393 MLST8Q9BVC4 326 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 NDUFA3O95167 84 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 TMEM258P61165 79 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 VKORC1L1Q8N0U8 176 aa7.37□□□□□ -1.23
PTPRA-204ENST00000380393 DOCK10Q96BY6 2186 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PIEZO2Q9H5I5 2752 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 DSPP15924 2871 aaKnown RBP7.36□□□□□ -1.23
PTPRA-204ENST00000380393 HOXA4Q00056 320 aaPredicted RBP7.36□□□□□ -1.23
PTPRA-204ENST00000380393 FAM19A4Q96LR4 140 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PROK2Q9HC23 129 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PIEZO1Q92508 2521 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 EML6Q6ZMW3 1958 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 FREM1Q5H8C1 2179 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 NCOR2Q9Y618 2525 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 TFF1P04155 84 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PFN2P35080 140 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 RPL13AP40429 203 aaKnown RBP7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PCBD1P61457 104 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 PAX8Q06710 450 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 EBI3Q14213 229 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 SIRPDQ9H106 197 aa7.36□□□□□ -1.23
PTPRA-204ENST00000380393 TRAV41A0A0B4J266 112 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 SMKR1H3BMG3 65 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 CXorf67Q86X51 503 aaPredicted RBP7.35□□□□□ -1.23
PTPRA-204ENST00000380393 FAM167A-AS1Q96KT0 104 aa7.35□□□□□ -1.23
PTPRA-204ENST00000380393 RPUSD1Q9UJJ7 312 aaKnown RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 158 ms