RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 LCNL1Q6ZST4 164 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 TMEM75Q8N9X5 138 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 MRPL16Q9NX20 251 aaKnown RBP9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 AGRNO00468 2067 aa9.83□□□□□ -0.84
PRPF40B-202ENST00000380281 SPINK8P0C7L1 97 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 DKK2Q9UBU2 259 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 CACNA1AO00555 2505 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 HRNRQ86YZ3 2850 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 IGKV2-40A0A087WW87 121 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 VSTM5A8MXK1 200 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 IGKV2D-40P01614 121 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 MT-ATP8P03928 68 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 HLA-DMBP28068 263 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 MRGPRG-AS1Q2M3A8 158 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 TMEM155Q4W5P6 130 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 C8orf46Q8TAG6 207 aa9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 COL25A1Q9BXS0 654 aaPredicted RBP9.82□□□□□ -0.84
PRPF40B-202ENST00000380281 IGKV2D-26A0A0A0MRZ7 120 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 Q86TA4 180 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 SYT8Q8NBV8 401 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 F8W1H4 67 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 J3KRW8 73 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 THAP8Q8NA92 274 aa9.81□□□□□ -0.84
PRPF40B-202ENST00000380281 SETD2Q9BYW2 2564 aaPredicted RBP9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 NPIPB6E9PJ23 425 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 AMN1Q8IY45 258 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 ZNF414Q96IQ9 312 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 PSG8Q9UQ74 426 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 A0A1B0GWB2 263 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 MLST8Q9BVC4 326 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 PRSS22Q9GZN4 317 aa9.8□□□□□ -0.84
PRPF40B-202ENST00000380281 A6NJY4 79 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 NPIPB5A8MRT5 1133 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 BUB1B-PAK6H3BSN5 160 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 MYCNOSP40205 109 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 POLQO75417 2590 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 FOXC1Q12948 553 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 C5orf64Q2M2E5 130 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 GAGE13Q4V321 117 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 DEFB104AQ8WTQ1 72 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 PHLDA1Q8WV24 401 aaPredicted RBP9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 GLMPQ8WWB7 406 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 FMC1Q96HJ9 113 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 ZNF479Q96JC4 524 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 CHAC1Q9BUX1 264 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 NGBQ9NPG2 151 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 CT45A10P0DMU9 189 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 TRGV9Q99603 122 aa9.79□□□□□ -0.84
PRPF40B-202ENST00000380281 TEX22C9J3V5 150 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 D6R8Y8 96 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 SIVA1O15304 175 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 TSPAN13O95857 204 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 NUP37Q8NFH4 326 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 C19orf71A6NCJ1 209 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 SHISA9B4DS77 424 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 B5MCH6 92 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 IGLL5B9A064 214 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 SPRY2O43597 315 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 APOMO95445 188 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 ATP5IP56385 69 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 LGALS9BQ3B8N2 356 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 LGALS9CQ6DKI2 356 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 LYZL1Q6UWQ5 148 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 ZNF418Q8TF45 676 aaPredicted RBP9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 SIGLEC8Q9NYZ4 499 aa9.78□□□□□ -0.84
PRPF40B-202ENST00000380281 CEACAM4O75871 244 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 FCER1GP30273 86 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 DPF1Q92782 380 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 RNF125Q96EQ8 232 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 MSRB1Q9NZV6 116 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 TLN2Q9Y4G6 2542 aa9.77□□□□□ -0.84
PRPF40B-202ENST00000380281 ORM1P02763 201 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 CD3EP07766 207 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 CRIP1P50238 77 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 DLX6P56179 175 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 SFTA2Q6UW10 78 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 SOX21Q9Y651 276 aaPredicted RBP9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 FHL3Q13643 280 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 CDIP1Q9H305 208 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 PGPEP1Q9NXJ5 209 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 FAM208BQ5VWN6 2430 aa9.77□□□□□ -0.85
PRPF40B-202ENST00000380281 ZNF785A8K8V0 405 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 E9PLD3 99 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 HAX1O00165 279 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 EVI2AP22794 236 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 XGP55808 180 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 HERV-K104P63124 156 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 TWIST1Q15672 202 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 IFI27L1Q96BM0 104 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 SCNM1Q9BWG6 230 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 IGLV2-11P01706 119 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 LINC00527Q9UJ94 153 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 KLF12Q9Y4X4 402 aa9.76□□□□□ -0.85
PRPF40B-202ENST00000380281 GAS8-AS1O95177 125 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms