RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 PRR31Q5SQ13 230 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 TMEM158Q8WZ71 300 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 LINC00479Q96M42 142 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 ZNF492Q9P255 531 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
PRDM16-203ENST00000378391 MLANAQ16655 118 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 BUB1B-PAK6H3BSN5 160 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 YPEL3P61236 119 aaPredicted RBP11.72□□□□□ -0.53
PRDM16-203ENST00000378391 WFDC9Q8NEX5 89 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 FER1L5A0AVI2 2057 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 A0A1B0GX51 115 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 ANKRD39Q53RE8 183 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 VMO1Q7Z5L0 202 aa11.72□□□□□ -0.53
PRDM16-203ENST00000378391 MYO7BQ6PIF6 2116 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 FAM236AA0A1B0GUQ0 79 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 FAM236BA0A1B0GV22 79 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 MMP23AO75900 390 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 IGKV1-16P04430 117 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 DTX1Q86Y01 620 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 Q8TAT8 98 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 MBD3L4A6NDZ8 208 aaPredicted RBP11.71□□□□□ -0.53
PRDM16-203ENST00000378391 MBD3L3A6NE82 208 aaPredicted RBP11.71□□□□□ -0.53
PRDM16-203ENST00000378391 MBD3L5A6NJ08 208 aaPredicted RBP11.71□□□□□ -0.53
PRDM16-203ENST00000378391 MBD3L2Q8NHZ7 208 aaPredicted RBP11.71□□□□□ -0.53
PRDM16-203ENST00000378391 RNF183Q96D59 192 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 CLUHP3Q96NS8 147 aa11.71□□□□□ -0.53
PRDM16-203ENST00000378391 FXYD7P58549 80 aa11.71□□□□□ -0.54
PRDM16-203ENST00000378391 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.54
PRDM16-203ENST00000378391 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.54
PRDM16-203ENST00000378391 YPEL4Q96NS1 127 aa11.71□□□□□ -0.54
PRDM16-203ENST00000378391 IGHG3P01860 377 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 ZNF876PQ49A33 203 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 THADAQ6YHU6 1953 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 M0R1W7 72 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 RS1O15537 224 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 SHANK2-AS3Q9BTD1 123 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 TMEM14BQ9NUH8 114 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 DOCK8Q8NF50 2099 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 VGLL1Q99990 258 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 SRRM4A7MD48 611 aaKnown RBP11.7□□□□□ -0.54
PRDM16-203ENST00000378391 VDAC2P45880 294 aaPredicted RBP11.7□□□□□ -0.54
PRDM16-203ENST00000378391 DPH3Q96FX2 82 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 C11orf1Q9H5F2 150 aa11.7□□□□□ -0.54
PRDM16-203ENST00000378391 IGHV3-64A0A075B6Q5 118 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 Q6ZSR3 168 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 Q6ZWC4 215 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
PRDM16-203ENST00000378391 COA6Q5JTJ3 125 aaKnown RBP11.69□□□□□ -0.54
PRDM16-203ENST00000378391 JPT2Q9H910 190 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 LINC00527Q9UJ94 153 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 NBASA2RRP1 2371 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 PROK2Q9HC23 129 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 DOCK10Q96BY6 2186 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 ARMS2P0C7Q2 107 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 TRAV12-1A0A0B4J245 112 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 TRAV40A0A0B4J280 105 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 TAX1BP3O14907 124 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 PRB2P02812 416 aaPredicted RBP11.69□□□□□ -0.54
PRDM16-203ENST00000378391 TAL2Q16559 108 aa11.69□□□□□ -0.54
PRDM16-203ENST00000378391 CRIP3Q6Q6R5 217 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 C2orf16Q68DN1 1984 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 ADARB2-AS1A8MUL3 147 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 TRGV4A0A0C4DH28 118 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 SRD5A1P18405 259 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 FAM231DQ6ZW35 169 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 NTN5Q8WTR8 489 aaPredicted RBP11.68□□□□□ -0.54
PRDM16-203ENST00000378391 DOCK11Q5JSL3 2073 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 M0QXV9 152 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 TEX43Q6ZNM6 134 aa11.68□□□□□ -0.54
PRDM16-203ENST00000378391 EFNA4P52798 201 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 MCRIP2Q9BUT9 160 aaKnown RBP11.67□□□□□ -0.54
PRDM16-203ENST00000378391 GPR179Q6PRD1 2367 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 PCNX3Q9H6A9 2034 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 BVES-AS1Q5T3Y7 98 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 MORN5Q5VZ52 161 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 C14orf178Q8N769 122 aaPredicted RBP11.67□□□□□ -0.54
PRDM16-203ENST00000378391 TMEM131Q92545 1883 aa11.67□□□□□ -0.54
PRDM16-203ENST00000378391 SMKR1H3BMG3 65 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 LINC00158P58513 81 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 KLRD1Q13241 179 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 RNF138Q8WVD3 245 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 ACYP1P07311 99 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 CHCHD5Q9BSY4 110 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 NDUFA4L2Q9NRX3 87 aa11.66□□□□□ -0.54
PRDM16-203ENST00000378391 PAX4O43316 350 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 EGR2P11161 476 aaPredicted RBP11.65□□□□□ -0.54
PRDM16-203ENST00000378391 RCHY1Q96PM5 261 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 V9GYV3 84 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 CACNA1BQ00975 2339 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 FAM104BQ5XKR9 115 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 MPLKIPQ8TAP9 179 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
PRDM16-203ENST00000378391 TRAV12-2A0A075B6T6 113 aa11.65□□□□□ -0.55
PRDM16-203ENST00000378391 NBL1P41271 181 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms