RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 EML5Q05BV3 1969 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV3-73A0A0B4J1V6 119 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV2-5P01817 119 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 C18orf32Q8TCD1 76 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 C11orf52Q96A22 123 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 K7EN84 100 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 DUSP14O95147 198 aaKnown RBP10.46□□□□□ -0.74
NPHP4-203ENST00000378169 NSUN5P1Q3KNT7 163 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 PAPPA-AS1Q5QFB9 102 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 PET117Q6UWS5 81 aa10.46□□□□□ -0.74
NPHP4-203ENST00000378169 LAMA1P25391 3075 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 BRWD1-AS2P59051 145 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 SRSF1Q07955 248 aaKnown RBP eCLIP10.45□□□□□ -0.74
NPHP4-203ENST00000378169 ODF3L1Q8IXM7 274 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 TTC9CQ8N5M4 171 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 DOPEY1Q5JWR5 2465 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 HLA-DMBP28068 263 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 NRGNQ92686 78 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 NUP210LQ5VU65 1888 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 K7ERU9 68 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 IFI27P40305 119 aaPredicted RBP10.45□□□□□ -0.74
NPHP4-203ENST00000378169 Q5PR19 223 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 SFTA2Q6UW10 78 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 KLHL30-AS1Q8NEE0 82 aa10.45□□□□□ -0.74
NPHP4-203ENST00000378169 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV4-61A0A0C4DH41 118 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 FAM223BA6NKX1 122 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 C21orf62-AS1Q17RA5 79 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 C1orf194Q5T5A4 169 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 FAM223AQ8IWN6 122 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 TYMSP04818 313 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 IL17RELQ6ZVW7 336 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 MRPL36Q9P0J6 103 aaKnown RBP10.44□□□□□ -0.74
NPHP4-203ENST00000378169 TMEM75Q8N9X5 138 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 LINC00477Q96M19 166 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 TMEM262E9PQX1 116 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 APOMO95445 188 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
NPHP4-203ENST00000378169 MEIG1Q5JSS6 88 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 H3BRN7 92 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 CIDEAO60543 219 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 PRR25Q96S07 402 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 WDFY4Q6ZS81 3184 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 TNRC6AQ8NDV7 1962 aaKnown RBP10.43□□□□□ -0.74
NPHP4-203ENST00000378169 A0A087WWL8 130 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 PATE2Q6UY27 113 aa10.43□□□□□ -0.74
NPHP4-203ENST00000378169 IGLV1-47P01700 117 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 HTN3P15516 51 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 C8orf86Q6ZUL3 223 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 C8orf31Q8N9H6 132 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 ZC2HC1AQ96GY0 325 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 VGLL1Q99990 258 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 MRPL27Q9P0M9 148 aaKnown RBP10.42□□□□□ -0.74
NPHP4-203ENST00000378169 HOXB4P17483 251 aaPredicted RBP10.42□□□□□ -0.74
NPHP4-203ENST00000378169 OR11H6Q8NGC7 330 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 C11orf1Q9H5F2 150 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 LRP4O75096 1905 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 PKD1L2Q7Z442 2459 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 SYS1-DBNDD2H3BUS1 97 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 SAP30O75446 220 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 DPM2O94777 84 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 PLP1P60201 277 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 Q96MF0 132 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 VPS13AQ96RL7 3174 aa10.42□□□□□ -0.74
NPHP4-203ENST00000378169 TMEM8BA6NDV4 472 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 SNCGO76070 127 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 Q0VG73 95 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 KMT2EQ8IZD2 1858 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 VCX2Q9H322 139 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 SMIM13P0DJ93 91 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 SMAGPQ0VAQ4 97 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 CD300EQ496F6 205 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-203ENST00000378169 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 A8MWP6 167 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 K7EIM0 57 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 DEFB131AP59861 70 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 GTSCR1Q86UQ5 136 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 NHP2Q9NX24 153 aaKnown RBP10.41□□□□□ -0.74
NPHP4-203ENST00000378169 C1orf229Q6ZS94 237 aaPredicted RBP10.41□□□□□ -0.74
NPHP4-203ENST00000378169 TOMM7Q9P0U1 55 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 ZNF492Q9P255 531 aa10.41□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV4-30-2A0A087WSY4 118 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV4-39P01824 125 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 CGB3P0DN86 165 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 CGB7P0DN87 165 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 ZFP36P26651 326 aaKnown RBP10.4□□□□□ -0.74
NPHP4-203ENST00000378169 TMEM95Q3KNT9 176 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 ZNF295-AS1Q8N0V1 137 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 TMEM158Q8WZ71 300 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 NAA38Q9BRA0 125 aaKnown RBP10.4□□□□□ -0.74
NPHP4-203ENST00000378169 IGHV7-81A0A0B4J1V7 117 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 SMIM12Q96EX1 92 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 ZNF462Q96JM2 2506 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 SPEGQ15772 3267 aa10.4□□□□□ -0.74
NPHP4-203ENST00000378169 H3BUT2 72 aa10.4□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 192.5 ms