RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ZNF833PQ6ZTB9 187 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 TNRC6AQ8NDV7 1962 aaKnown RBP6.76□□□□□ -1.33
VPS36-201ENST00000378060 TGFAP01135 160 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 ESDP10768 282 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRR20EP86478 221 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRR20CP86479 221 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRR20DP86480 221 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRR20BP86481 221 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRR20AP86496 221 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 ZNF114Q8NC26 417 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 Q8TAT8 98 aa6.76□□□□□ -1.33
VPS36-201ENST00000378060 PRSS46E5RG02 174 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 MORN3Q6PF18 240 aaPredicted RBP6.75□□□□□ -1.33
VPS36-201ENST00000378060 USMG5Q96IX5 58 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 NAA38Q9BRA0 125 aaKnown RBP6.75□□□□□ -1.33
VPS36-201ENST00000378060 TMEM8BA6NDV4 472 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 VWC2Q2TAL6 325 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 TOMM7Q9P0U1 55 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 PKD1L2Q7Z442 2459 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 USP24Q9UPU5 2620 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 TRBV19A0A075B6N1 114 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 A0A0G2JNJ9 132 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 HAX1O00165 279 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 RNASE1P07998 156 aaKnown RBP6.75□□□□□ -1.33
VPS36-201ENST00000378060 ANAPC13Q9BS18 74 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 CHAC1Q9BUX1 264 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 Q9UFV3 132 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 PTPRQQ9UMZ3 2332 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 PCNX3Q9H6A9 2034 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 TNFRSF6BO95407 300 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 GAGE2BQ13066 116 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 SLAQ13239 276 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 ATXN8Q156A1 80 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 C17orf58Q2M2W7 97 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 GAGE2EQ4V326 116 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 LYPD2Q6UXB3 125 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 GAGE2DQ9UEU5 116 aa6.75□□□□□ -1.33
VPS36-201ENST00000378060 ARFGEF3Q5TH69 2177 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 SRRM4A7MD48 611 aaKnown RBP6.74□□□□□ -1.33
VPS36-201ENST00000378060 IGLV1-44P01699 117 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 SPACA3Q8IXA5 215 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 TRGV2A0A075B6R0 118 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 LGALS9BQ3B8N2 356 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 LGALS9CQ6DKI2 356 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 M0R2P5 195 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 IGLL1P15814 213 aa6.74□□□□□ -1.33
VPS36-201ENST00000378060 TRAV8-4A0A0B4J246 113 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 FAM223BA6NKX1 122 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 IGHV4-39P01824 125 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 OCIAD2Q56VL3 154 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 FAM223AQ8IWN6 122 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 CST9LQ9H4G1 147 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 MSRB2Q9Y3D2 182 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 EXPH5Q8NEV8 1989 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 EPG5Q9HCE0 2579 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 IGLV3-9A0A075B6K5 115 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 ZNF503-AS2A6NEH8 195 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 COX8AP10176 69 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 KLRD1Q13241 179 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 ZNF876PQ49A33 203 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 TEX36Q5VZQ5 186 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 TRAV40A0A0B4J280 105 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 FXYD7P58549 80 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 WT1-ASQ06250 92 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 ZFAND6Q6FIF0 208 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 STPG4Q8N801 248 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 WIPF2Q8TF74 440 aaPredicted RBP6.73□□□□□ -1.33
VPS36-201ENST00000378060 SMKR1H3BMG3 65 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 PRR31Q5SQ13 230 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
VPS36-201ENST00000378060 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
VPS36-201ENST00000378060 NCOA6Q14686 2063 aaPredicted RBP6.72□□□□□ -1.33
VPS36-201ENST00000378060 FAM208BQ5VWN6 2430 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 ZFYVE26Q68DK2 2539 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 IGSF10Q6WRI0 2623 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 KIR2DL5BA0A0G2JN68 375 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 KIR2DL5BA0A0G2JPC4 375 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 NDUFS8O00217 210 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 CMC4P56277 68 aaPredicted RBP6.72□□□□□ -1.33
VPS36-201ENST00000378060 STHQ8IWL8 128 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 KIR2DL5AQ8N109 375 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 C14orf178Q8N769 122 aaPredicted RBP6.72□□□□□ -1.33
VPS36-201ENST00000378060 C9orf118A6NHY6 69 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 DSCR9P59020 149 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 Q8N8P6 123 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 TLN1Q9Y490 2541 aaKnown RBP6.72□□□□□ -1.33
VPS36-201ENST00000378060 CFAP46Q8IYW2 2715 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 TMEM213A2RRL7 107 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 K7EM74 188 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 PF4P02776 101 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 NPSP0C0P6 89 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 TMEM95Q3KNT9 176 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 PGPEP1Q9NXJ5 209 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 LINC00527Q9UJ94 153 aa6.72□□□□□ -1.33
VPS36-201ENST00000378060 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
VPS36-201ENST00000378060 IGHV1-24A0A0C4DH33 117 aa6.71□□□□□ -1.33
VPS36-201ENST00000378060 E7EQL1 145 aa6.71□□□□□ -1.33
VPS36-201ENST00000378060 ZNF134P52741 427 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms