RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RASL11AQ6T310 242 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 RAB37Q96AX2 223 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 C17orf77Q96MU5 243 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 SAP30O75446 220 aa11.42□□□□□ -0.58
TCOF1-202ENST00000377797 H7C1H1 209 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 NIT1Q86X76 327 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 INS-IGF2F8WCM5 200 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 PKD1L2Q7Z442 2459 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 C7orf71A4D174 169 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 TMEM75Q8N9X5 138 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 TRAV12-3A0A0B4J271 114 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 TMEM95Q3KNT9 176 aa11.41□□□□□ -0.58
TCOF1-202ENST00000377797 ZNF462Q96JM2 2506 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 VPREB3Q9UKI3 123 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 FSTL3O95633 263 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 EVI2AP22794 236 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 GCSHP23434 173 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 CACNG7P62955 275 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 TNFRSF18Q9Y5U5 241 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 NDUFA3O95167 84 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 NCR2O95944 276 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 AMMECR1LQ6DCA0 310 aa11.4□□□□□ -0.58
TCOF1-202ENST00000377797 C11orf71Q6IPW1 123 aa11.4□□□□□ -0.59
TCOF1-202ENST00000377797 ZNF256Q9Y2P7 627 aaPredicted RBP11.4□□□□□ -0.59
TCOF1-202ENST00000377797 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
TCOF1-202ENST00000377797 ZNF492Q9P255 531 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 V9GYV3 84 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 C8orf49Q96NF6 230 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 ASPHD1Q5U4P2 390 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 HCFC1P51610 2035 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 D6R8Y8 96 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 PRDM13Q9H4Q3 707 aa11.39□□□□□ -0.59
TCOF1-202ENST00000377797 CTSGP08311 255 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 JOSD1Q15040 202 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-202ENST00000377797 C5orf56Q8N8D9 126 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 PRR25Q96S07 402 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 ATP5LO75964 103 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 PMCHL2Q9BQD1 86 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 ADAMTS20P59510 1910 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 ABCA12Q86UK0 2595 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 EMP1P54849 157 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 Q71RC1 249 aaPredicted RBP11.38□□□□□ -0.59
TCOF1-202ENST00000377797 SCGB3A1Q96QR1 104 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 NXT2Q9NPJ8 142 aaKnown RBP11.38□□□□□ -0.59
TCOF1-202ENST00000377797 TMEM160Q9NX00 188 aa11.38□□□□□ -0.59
TCOF1-202ENST00000377797 LOC107984156A0A0G2JMH3 177 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 ELANEP08246 267 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 DEFB131AP59861 70 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 FAM231DQ6ZW35 169 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 ARL17AQ8IVW1 177 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 FXYD7P58549 80 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 C14orf144Q96I85 54 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 H3BUA1 57 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 CRYGCP07315 174 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 SMAGPQ0VAQ4 97 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 OR1N2Q8NGR9 330 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 NDUFAF3Q9BU61 184 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 FASNP49327 2511 aaKnown RBP11.37□□□□□ -0.59
TCOF1-202ENST00000377797 TRIOO75962 3097 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 DNLZQ5SXM8 178 aa11.37□□□□□ -0.59
TCOF1-202ENST00000377797 TRGV11A0A075B6L2 103 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 A6NJY4 79 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 TRGV2A0A075B6R0 118 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 ODF3BA8MYP8 253 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 HBDP02042 147 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 DYNAPQ8N1N2 210 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 OR11H1Q8NG94 326 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 FOXC2Q99958 501 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 GFRA4Q9GZZ7 299 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 CT83Q5H943 113 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 TCTEX1D4Q5JR98 221 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 CDH23Q9H251 3354 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 K7EN84 100 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 UBE2L6O14933 153 aa11.36□□□□□ -0.59
TCOF1-202ENST00000377797 PRRC2AP48634 2157 aaKnown RBP11.35□□□□□ -0.59
TCOF1-202ENST00000377797 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 TYMSP04818 313 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 GP9P14770 177 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 CHCHD1Q96BP2 118 aaKnown RBP11.35□□□□□ -0.59
TCOF1-202ENST00000377797 VGLL1Q99990 258 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 FAM231BA6NCW3 169 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 ST20Q9HBF5 79 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 LINC01619G3V211 115 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 PAPPA-AS1Q5QFB9 102 aa11.35□□□□□ -0.59
TCOF1-202ENST00000377797 MRPL27Q9P0M9 148 aaKnown RBP11.35□□□□□ -0.59
TCOF1-202ENST00000377797 A0A1B0GUS0 222 aa11.34□□□□□ -0.59
TCOF1-202ENST00000377797 ZC2HC1AQ96GY0 325 aa11.34□□□□□ -0.59
TCOF1-202ENST00000377797 FANCD2OSQ96PS1 177 aa11.34□□□□□ -0.59
TCOF1-202ENST00000377797 HIST1H4GQ99525 98 aa11.34□□□□□ -0.59
TCOF1-202ENST00000377797 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
TCOF1-202ENST00000377797 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.34□□□□□ -0.59
TCOF1-202ENST00000377797 JMJD1CQ15652 2540 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms