RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 HOXA3O43365 443 aaPredicted RBP13.38□□□□□ -0.27
NKX2-2-201ENST00000377142 TEX29Q8N6K0 151 aa13.38□□□□□ -0.27
NKX2-2-201ENST00000377142 SSBP4Q9BWG4 385 aaPredicted RBP13.38□□□□□ -0.27
NKX2-2-201ENST00000377142 KMT2BQ9UMN6 2715 aaPredicted RBP13.37□□□□□ -0.27
NKX2-2-201ENST00000377142 ABCA12Q86UK0 2595 aa13.37□□□□□ -0.27
NKX2-2-201ENST00000377142 A0A1B0GUT8 65 aa13.37□□□□□ -0.27
NKX2-2-201ENST00000377142 F2Z2F3 143 aa13.37□□□□□ -0.27
NKX2-2-201ENST00000377142 C16orf92Q96LL3 132 aa13.37□□□□□ -0.27
NKX2-2-201ENST00000377142 A0A1B0GW15 77 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 RIGQ13278 110 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 ZNF702PQ9H963 129 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 DAZ1Q9NQZ3 744 aaKnown RBP13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 SRSF2Q01130 221 aaKnown RBP13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 ERCC8Q13216 396 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 BORCS7Q96B45 105 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 GSN-AS1Q9NRJ2 163 aa13.36□□□□□ -0.27
NKX2-2-201ENST00000377142 K7EMT4 169 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 KLF5Q13887 457 aaPredicted RBP13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 FAM106AQ4KMX7 169 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 TMEM78Q5T7P6 136 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 CDPF1Q6NVV7 123 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 KCNS1Q96KK3 526 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 FOXE3Q13461 319 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 GPHB5Q86YW7 130 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 GATD1Q8NB37 220 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 WFDC11Q8NEX6 87 aa13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 ALKBH7Q9BT30 221 aaPredicted RBP13.35□□□□□ -0.27
NKX2-2-201ENST00000377142 ELANEP08246 267 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 ARMS2P0C7Q2 107 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 ZNF80P51504 273 aaPredicted RBP13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 ZNF138P52744 262 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 C9orf47Q6ZRZ4 202 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 SAMD10Q9BYL1 202 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 APCP25054 2843 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 CREBBPQ92793 2442 aa13.34□□□□□ -0.27
NKX2-2-201ENST00000377142 DOPEY2Q9Y3R5 2298 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 HIST2H2BCQ6DN03 193 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 C10orf99Q6UWK7 81 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 IL17RELQ6ZVW7 336 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 RCHY1Q96PM5 261 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 RHPN1-AS1Q9BWJ2 59 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 AGPAT4-IT1Q9H0P7 198 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 PPP1R14DQ9NXH3 145 aa13.33□□□□□ -0.27
NKX2-2-201ENST00000377142 FABP5P3A8MUU1 101 aa13.33□□□□□ -0.28
NKX2-2-201ENST00000377142 SOCS3O14543 225 aa13.33□□□□□ -0.28
NKX2-2-201ENST00000377142 MYOZ3Q8TDC0 251 aa13.33□□□□□ -0.28
NKX2-2-201ENST00000377142 NRN1Q9NPD7 142 aa13.33□□□□□ -0.28
NKX2-2-201ENST00000377142 ZANQ9Y493 2812 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 TM4SF20Q53R12 229 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 SMPXQ9UHP9 88 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 UFC1Q9Y3C8 167 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 TMSB15BA0A087X1C1 80 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 RPLP1P05386 114 aaKnown RBP13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 ZNF738Q8NE65 137 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 TPPP3Q9BW30 176 aa13.32□□□□□ -0.28
NKX2-2-201ENST00000377142 TENM4Q6N022 2769 aa13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 LOC102724200A0A096LPH7 203 aaPredicted RBP13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 IQCJQ1A5X6 159 aa13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 Q8N2B8 174 aa13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 SIGLECL1Q8N7X8 197 aa13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 LENEPQ9Y5L5 61 aa13.31□□□□□ -0.28
NKX2-2-201ENST00000377142 LGALS1P09382 135 aaKnown RBP13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 CTRLP40313 264 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 LINC01559Q495D7 138 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 LYZL1Q6UWQ5 148 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 TMEM86BQ8N661 226 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 RNF152Q8N8N0 203 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 C20orf173Q96LM9 149 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 CHD6Q8TD26 2715 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 OVOL1O14753 267 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 GPX1P07203 203 aa13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 RPL11P62913 178 aaKnown RBP13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 HIST1H1AQ02539 215 aaPredicted RBP13.3□□□□□ -0.28
NKX2-2-201ENST00000377142 ORM1P02763 201 aa13.29□□□□□ -0.28
NKX2-2-201ENST00000377142 AMTP48728 403 aa13.29□□□□□ -0.28
NKX2-2-201ENST00000377142 SAMD13Q5VXD3 122 aa13.29□□□□□ -0.28
NKX2-2-201ENST00000377142 FER1L6-AS1Q8NA97 138 aa13.29□□□□□ -0.28
NKX2-2-201ENST00000377142 UBE2E2Q96LR5 201 aa13.29□□□□□ -0.28
NKX2-2-201ENST00000377142 IGLC6P0CF74 106 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 ZNF493Q6ZR52 646 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 Q6ZWC4 215 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 REC114Q7Z4M0 266 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 OR10J6PQ8NGY7 276 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 LINC00477Q96M19 166 aa13.28□□□□□ -0.28
NKX2-2-201ENST00000377142 PMCHP20382 165 aa13.27□□□□□ -0.28
NKX2-2-201ENST00000377142 PRR31Q5SQ13 230 aa13.27□□□□□ -0.29
NKX2-2-201ENST00000377142 TMEM213A2RRL7 107 aa13.26□□□□□ -0.29
NKX2-2-201ENST00000377142 HSBP1O75506 76 aa13.26□□□□□ -0.29
NKX2-2-201ENST00000377142 SCGB1D1O95968 90 aa13.26□□□□□ -0.29
NKX2-2-201ENST00000377142 FOXC2Q99958 501 aa13.26□□□□□ -0.29
NKX2-2-201ENST00000377142 NAGKQ9UJ70 344 aa13.26□□□□□ -0.29
NKX2-2-201ENST00000377142 LGALS9O00182 355 aa13.25□□□□□ -0.29
NKX2-2-201ENST00000377142 DUX5Q96PT3 197 aa13.25□□□□□ -0.29
NKX2-2-201ENST00000377142 DMRTA1Q5VZB9 504 aa13.25□□□□□ -0.29
NKX2-2-201ENST00000377142 RNASEKQ6P5S7 137 aaKnown RBP13.25□□□□□ -0.29
NKX2-2-201ENST00000377142 ZNF575Q86XF7 245 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms