RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 MAP1LC3BQ9GZQ8 125 aa9.39□□□□□ -0.91
CLCN6-205ENST00000376492 MANBALQ9NQG1 85 aa9.39□□□□□ -0.91
CLCN6-205ENST00000376492 AGRNO00468 2067 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 A0A087X0K7 114 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 HLA-DRB4P13762 266 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 FAM122CQ6P4D5 195 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 FOXI2Q6ZQN5 318 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 C16orf92Q96LL3 132 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 FAM210AQ96ND0 272 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 TCEAL7Q9BRU2 100 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 SAV1Q9H4B6 383 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-205ENST00000376492 RFNGQ9Y644 331 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 HLA-DRB4X5D2U9 266 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
CLCN6-205ENST00000376492 MRPS12O15235 138 aaKnown RBP9.37□□□□□ -0.91
CLCN6-205ENST00000376492 SPATA31B1PQ5VZV4 182 aa9.37□□□□□ -0.91
CLCN6-205ENST00000376492 BPIFA4PQ86YQ2 179 aa9.37□□□□□ -0.91
CLCN6-205ENST00000376492 C20orf173Q96LM9 149 aa9.37□□□□□ -0.91
CLCN6-205ENST00000376492 TRAV8-2A0A0B4J237 113 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 NUTF2P61970 127 aaKnown RBP9.36□□□□□ -0.91
CLCN6-205ENST00000376492 PDE6HQ13956 83 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 PEA15Q15121 130 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 GUK1Q16774 197 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 GCSAMLQ5JQS6 135 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 GDF5OSQ5U4N7 250 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 UBE2DNLQ8IWF7 75 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 LYPD1Q8N2G4 141 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 FAM167A-AS1Q96KT0 104 aa9.36□□□□□ -0.91
CLCN6-205ENST00000376492 A0A1W2PRE2 83 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 ZNF253O75346 499 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 DEFB1P60022 68 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 MORN5Q5VZ52 161 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 EBLN2Q6P2I7 272 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 LCN15Q6UWW0 184 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 OR51M1Q9H341 326 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
CLCN6-205ENST00000376492 A0A0J9YX75 114 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 RBFOX3A6NFN3 312 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 HIST1H1EP10412 219 aaKnown RBP9.34□□□□□ -0.91
CLCN6-205ENST00000376492 BCL2P10415 239 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 GCHFRP30047 84 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 EMP1P54849 157 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 ZNF506Q5JVG8 444 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 IGFL4Q6B9Z1 124 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 MIR17HGQ75NE6 70 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 C1QTNF4Q9BXJ3 329 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 HERC1Q15751 4861 aa9.34□□□□□ -0.91
CLCN6-205ENST00000376492 TRAV5A0A0B4J249 113 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 A8MTW9 85 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 F6UB75 175 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 ARL14EPLP0DKL9 152 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 IGLC2P0DOY2 106 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 C1orf134Q5TEV5 83 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 COMMD7Q86VX2 200 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 PAXXQ9BUH6 204 aa9.33□□□□□ -0.92
CLCN6-205ENST00000376492 APOBP04114 4563 aaKnown RBP9.32□□□□□ -0.92
CLCN6-205ENST00000376492 C16orf90A8MZG2 172 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 KRBOX1C9JBD0 128 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 TMEM250H0YL14 139 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 PDE6DO43924 150 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 OR7C2O60412 319 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 PSG9Q00887 426 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 MEF2BQ02080 365 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-205ENST00000376492 PSG3Q16557 428 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 SOHLH1Q5JUK2 328 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 RNF182Q8N6D2 247 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 OR4B1Q8NGF8 309 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 RPUSD4Q96CM3 377 aaKnown RBP9.32□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF503Q96F45 646 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 SLC50A1Q9BRV3 221 aa9.32□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF331Q9NQX6 463 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-205ENST00000376492 LOC102723971A0A1B0GUV8 181 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 H3BQ15 152 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 DUSP14O95147 198 aaKnown RBP9.31□□□□□ -0.92
CLCN6-205ENST00000376492 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 NBEAP1P0C6P0 100 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 SPART-AS1P0CW21 52 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 S100A1P23297 94 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 CCL20P78556 96 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 TNP2Q05952 138 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF705AQ6ZN79 300 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-205ENST00000376492 FXYD5Q96DB9 178 aa9.31□□□□□ -0.92
CLCN6-205ENST00000376492 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
CLCN6-205ENST00000376492 IGHV3OR16-12A0A075B7B8 117 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 FAM74A7A6NL05 159 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF705FA8MVS1 300 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 F6UZH7 168 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 CDK2AP2O75956 126 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF705DP0CH99 300 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 ZNF705BP0CI00 300 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 HTN3P15516 51 aa9.3□□□□□ -0.92
CLCN6-205ENST00000376492 CNN1P51911 297 aaKnown RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 FGF8P55075 233 aaPredicted RBP9.3□□□□□ -0.92
CLCN6-205ENST00000376492 FXYD7P58549 80 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms