RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 DEFB1P60022 68 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 HIST1H1AQ02539 215 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 CCDC144NLQ6NUI1 221 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 C1RLQ9NZP8 487 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 SPCS1Q9Y6A9 102 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PTPRBP23467 1997 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 H3BVH4 76 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 FCN3O75636 299 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 EMP1P54849 157 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 K7EIM0 57 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 MRPL51Q4U2R6 128 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
TNFRSF1B-201ENST00000376259 LY6DQ14210 128 aa11.33□□□□□ -0.59
TNFRSF1B-201ENST00000376259 KHDC1LQ5JSQ8 128 aa11.33□□□□□ -0.59
TNFRSF1B-201ENST00000376259 ZNF292O60281 2723 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 FABP5P3A8MUU1 101 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 HIST1H4GQ99525 98 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 RAXQ9Y2V3 346 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 NAV2Q8IVL1 2488 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TRAV30A0A087WSZ9 112 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 PSMB11A5LHX3 300 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 EGR2P11161 476 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 JKAMPQ9P055 326 aa11.33□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TEX22C9J3V5 150 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 K7EP13 123 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SRSF9Q13242 221 aaKnown RBP eCLIP11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 LRRK2Q5S007 2527 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 H7C2G1 150 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 FABP2P12104 132 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 IL17RELQ6ZVW7 336 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 NEU4Q8WWR8 484 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 METTL26Q96S19 204 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 NCOR1P1Q9H4R4 102 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 GAGE1Q13065 139 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 KIR3DS1Q14943 382 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 CST9LQ9H4G1 147 aa11.32□□□□□ -0.6
TNFRSF1B-201ENST00000376259 I3L2K1 104 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 K7ERJ3 54 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SIGLEC15Q6ZMC9 328 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TMEM158Q8WZ71 300 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 LOC107984156A0A0G2JMH3 177 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SMIM17P0DL12 118 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ARL17AQ8IVW1 177 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 WIPF2Q8TF74 440 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SAP30O75446 220 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 OR2K2Q8NGT1 345 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ZNF492Q9P255 531 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 PHLDA3Q9Y5J5 127 aa11.31□□□□□ -0.6
TNFRSF1B-201ENST00000376259 PRAC2D3DTV9 90 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TRGV3P03979 118 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 FAM104BQ5XKR9 115 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 KLF5Q13887 457 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 LINC00311Q8N616 119 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 PRR25Q96S07 402 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 JMJD8Q96S16 334 aa11.3□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ABCA12Q86UK0 2595 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 A0A0G2JLM5 398 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 A0A1B0GXF2 115 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 HAX1O00165 279 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 IGLV1-47P01700 117 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 MLST8Q9BVC4 326 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 EFNA4P52798 201 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 COL25A1Q9BXS0 654 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TRAV40A0A0B4J280 105 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 C19orf71A6NCJ1 209 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 H3BRN7 92 aa11.29□□□□□ -0.6
TNFRSF1B-201ENST00000376259 NEGR1Q7Z3B1 354 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TNFRSF14Q92956 283 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ATP6V0E1O15342 81 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 VKORC1Q9BQB6 163 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SVEP1Q4LDE5 3571 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 RNASE4P34096 147 aaKnown RBP11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 CRIP1P50238 77 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 OCIAD2Q56VL3 154 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
TNFRSF1B-201ENST00000376259 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.6
TNFRSF1B-201ENST00000376259 GAS8-AS1O95177 125 aa11.27□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SMIM13P0DJ93 91 aa11.27□□□□□ -0.6
TNFRSF1B-201ENST00000376259 Q8NA96 180 aa11.27□□□□□ -0.6
TNFRSF1B-201ENST00000376259 SCGB1C2P0DMR2 95 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 ZNF80P51504 273 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CT83Q5H943 113 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 Q6AWC8 147 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 C14orf178Q8N769 122 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 RAI1Q7Z5J4 1906 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 CEACAM4O75871 244 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 TNFRSF6BO95407 300 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 APOMO95445 188 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 GFRA4Q9GZZ7 299 aa11.27□□□□□ -0.61
TNFRSF1B-201ENST00000376259 PRSS22Q9GZN4 317 aa11.26□□□□□ -0.61
TNFRSF1B-201ENST00000376259 MS4A6AQ9H2W1 248 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms