RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 IGLV1-51P01701 117 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 S100A9P06702 114 aaKnown RBP7.83□□□□□ -1.16
PDPN-203ENST00000376061 ZNF688P0C7X2 276 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 TAS2R60P59551 318 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 DEFB1P60022 68 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 RPL23P62829 140 aaKnown RBP7.83□□□□□ -1.16
PDPN-203ENST00000376061 PAFAH1B2P68402 229 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 ADIRFQ15847 76 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 SHISA2Q6UWI4 295 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 LINC01551Q86U37 167 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 Q8N3U1 123 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 SPAG8Q99932 426 aaPredicted RBP7.83□□□□□ -1.16
PDPN-203ENST00000376061 VGLL1Q99990 258 aa7.83□□□□□ -1.16
PDPN-203ENST00000376061 RBAKDNA6NC62 111 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 M0R036 132 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 SNAPINO95295 136 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 LTAP01374 205 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 IGLV2-8P01709 118 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 SNRPD3P62318 126 aaKnown RBP7.82□□□□□ -1.16
PDPN-203ENST00000376061 FLI1Q01543 452 aaPredicted RBP7.82□□□□□ -1.16
PDPN-203ENST00000376061 PNRC1Q12796 327 aaPredicted RBP7.82□□□□□ -1.16
PDPN-203ENST00000376061 PSMG4Q5JS54 123 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 PRNTQ86SH4 94 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 NHLRC2Q8NBF2 726 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 OCC1Q8TAD7 63 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 Q8TAT8 98 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 AURKAIP1Q9NWT8 199 aaPredicted RBP7.82□□□□□ -1.16
PDPN-203ENST00000376061 PSG8Q9UQ74 426 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 LY96Q9Y6Y9 160 aa7.82□□□□□ -1.16
PDPN-203ENST00000376061 OR4C46A6NHA9 309 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 FBLL1A6NHQ2 334 aaKnown RBP7.81□□□□□ -1.16
PDPN-203ENST00000376061 NPIPB6E9PJ23 425 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 F6UB75 175 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 K7EN84 100 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 ERCC8Q13216 396 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 BAGE2Q86Y30 109 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 OR2K2Q8NGT1 345 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 ASCL2Q99929 193 aa7.81□□□□□ -1.16
PDPN-203ENST00000376061 ZNF256Q9Y2P7 627 aaPredicted RBP7.81□□□□□ -1.16
PDPN-203ENST00000376061 ZNF705DP0CH99 300 aaPredicted RBP7.8□□□□□ -1.16
PDPN-203ENST00000376061 ZNF705BP0CI00 300 aaPredicted RBP7.8□□□□□ -1.16
PDPN-203ENST00000376061 RHEBQ15382 184 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 C9orf47Q6ZRZ4 202 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 LURAP1LQ8IV03 231 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 OR8A1Q8NGG7 326 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 OR10J6PQ8NGY7 276 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 ISOC2Q96AB3 205 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 SMIM12Q96EX1 92 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 MLST8Q9BVC4 326 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 GPR61Q9BZJ8 451 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 AGPAT4-IT1Q9H0P7 198 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 MAP6D1Q9H9H5 199 aa7.8□□□□□ -1.16
PDPN-203ENST00000376061 SORL1Q92673 2214 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 C7orf77A4D0Y5 90 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 MGST1P10620 155 aaKnown RBP7.79□□□□□ -1.16
PDPN-203ENST00000376061 CD33P20138 364 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 HIST1H1AQ02539 215 aaPredicted RBP7.79□□□□□ -1.16
PDPN-203ENST00000376061 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 TMEM78Q5T7P6 136 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 C9orf66Q5T8R8 295 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 GDF5OSQ5U4N7 250 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 TMEM183AQ8IXX5 376 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 ZFP30Q9Y2G7 519 aa7.79□□□□□ -1.16
PDPN-203ENST00000376061 B4DEV8 164 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 SCO1O75880 301 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 GCGP01275 180 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 INSL3P51460 131 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 ZNF138P52744 262 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 DEFB131AP59861 70 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 OR5I1Q13606 314 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 WFDC9Q8NEX5 89 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 ZC2HC1AQ96GY0 325 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 C8orf49Q96NF6 230 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 PRR25Q96S07 402 aa7.78□□□□□ -1.16
PDPN-203ENST00000376061 AGRNO00468 2067 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 A0A0J9YX75 114 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 CT45A10P0DMU9 189 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 BEAN1Q3B7T3 259 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 RNF212Q495C1 297 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 SAPCD1Q5SSQ6 148 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 FOXI2Q6ZQN5 318 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 COX8CQ7Z4L0 72 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 SFRP2Q96HF1 295 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 NDFIP1Q9BT67 221 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 MCRIP2Q9BUT9 160 aaKnown RBP7.77□□□□□ -1.17
PDPN-203ENST00000376061 SAV1Q9H4B6 383 aaPredicted RBP7.77□□□□□ -1.17
PDPN-203ENST00000376061 RPS10P5Q9NQ39 176 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 PPP1R14DQ9NXH3 145 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 ZNF492Q9P255 531 aa7.77□□□□□ -1.17
PDPN-203ENST00000376061 A0A087WWC5 75 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 KNCNA6PVL3 124 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 MT-ND4LP03901 98 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 IGLL1P15814 213 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 ZNF124Q15973 351 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 PRR27Q6MZM9 219 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 LINC00322Q6ZN03 302 aaPredicted RBP7.76□□□□□ -1.17
PDPN-203ENST00000376061 FAM19A4Q96LR4 140 aa7.76□□□□□ -1.17
PDPN-203ENST00000376061 LINC00477Q96M19 166 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms