RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 MCRIP2Q9BUT9 160 aaKnown RBP10.83□□□□□ -0.68
C9orf47-203ENST00000375851 TMEM14CQ9P0S9 112 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 INSP01308 110 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 GUSBP1Q15486 140 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 HSD52Q0P140 79 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 C8orf86Q6ZUL3 223 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 OR9G4Q8NGQ1 327 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 C18orf32Q8TCD1 76 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 PRR25Q96S07 402 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 LSM4Q9Y4Z0 139 aaKnown RBP10.83□□□□□ -0.68
C9orf47-203ENST00000375851 TNCP24821 2201 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 IGHV2-5P01817 119 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 MALP21145 153 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 C11orf52Q96A22 123 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 V9GYV3 84 aa10.83□□□□□ -0.68
C9orf47-203ENST00000375851 FAM231DQ6ZW35 169 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 SCGB1A1P11684 91 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 RIPPLY3P57055 190 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 FXYD5Q96DB9 178 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 C1QTNF4Q9BXJ3 329 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 NDUFA4O00483 81 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 TNFRSF6BO95407 300 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 FAM120AOSQ5T036 256 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 ZC2HC1BQ5TFG8 222 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 ZNF491Q8N8L2 437 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 SEC11AP67812 179 aa10.82□□□□□ -0.68
C9orf47-203ENST00000375851 SPINK13Q1W4C9 94 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 ADAMTS9Q9P2N4 1935 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 A0A087WX48 190 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 ZNF664Q8N3J9 261 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 TLN1Q9Y490 2541 aaKnown RBP10.81□□□□□ -0.68
C9orf47-203ENST00000375851 SPOCK3Q9BQ16 436 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
C9orf47-203ENST00000375851 FAM104BQ5XKR9 115 aa10.81□□□□□ -0.68
C9orf47-203ENST00000375851 HIVEP2P31629 2446 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 HOXA3O43365 443 aaPredicted RBP10.8□□□□□ -0.68
C9orf47-203ENST00000375851 A8MWP6 167 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 PRSS46E5RG02 174 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 J3QLI3 93 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 LYPD6BQ8NI32 183 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 RNF114Q9Y508 228 aa10.8□□□□□ -0.68
C9orf47-203ENST00000375851 PCNX3Q9H6A9 2034 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 TEX43Q6ZNM6 134 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 BCL6BQ8N143 479 aaPredicted RBP10.79□□□□□ -0.68
C9orf47-203ENST00000375851 OR11H6Q8NGC7 330 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 XCL2Q9UBD3 114 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 NAV2Q8IVL1 2488 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 VWC2Q2TAL6 325 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 TCTEX1D4Q5JR98 221 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 ZNF479Q96JC4 524 aa10.79□□□□□ -0.68
C9orf47-203ENST00000375851 KNCNA6PVL3 124 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 LINC01619G3V211 115 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 SLAQ13239 276 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 C1orf159Q96HA4 380 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 PRO3102Q9H379 93 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 OBSL1O75147 1896 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 A0A087X0K7 114 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 HOXB4P17483 251 aaPredicted RBP10.78□□□□□ -0.68
C9orf47-203ENST00000375851 MPV17L2Q567V2 206 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 RBMY1BA6NDE4 496 aaKnown RBP10.78□□□□□ -0.68
C9orf47-203ENST00000375851 RBMY1EA6NEQ0 496 aaKnown RBP10.78□□□□□ -0.68
C9orf47-203ENST00000375851 RBMY1DP0C7P1 496 aaKnown RBP10.78□□□□□ -0.68
C9orf47-203ENST00000375851 RBMY1A1P0DJD3 496 aaKnown RBP10.78□□□□□ -0.68
C9orf47-203ENST00000375851 RBMY1CP0DJD4 496 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 DTX2Q86UW9 622 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 OR5A1Q8NGJ0 315 aa10.78□□□□□ -0.68
C9orf47-203ENST00000375851 J3QKU1 62 aa10.77□□□□□ -0.68
C9orf47-203ENST00000375851 PHLDA1Q8WV24 401 aaPredicted RBP10.77□□□□□ -0.68
C9orf47-203ENST00000375851 MORN3Q6PF18 240 aaPredicted RBP10.77□□□□□ -0.69
C9orf47-203ENST00000375851 MSMPQ1L6U9 139 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 ASPHD1Q5U4P2 390 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 ZC2HC1AQ96GY0 325 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 C17orf77Q96MU5 243 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 NAA38Q9BRA0 125 aaKnown RBP10.77□□□□□ -0.69
C9orf47-203ENST00000375851 IGHV4-61A0A0C4DH41 118 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 TTC32Q5I0X7 151 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 PLEKHB2Q96CS7 222 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 VGLL1Q99990 258 aa10.77□□□□□ -0.69
C9orf47-203ENST00000375851 CRPP02741 224 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 ADORA2A-AS1P86434 159 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 KLK9Q9UKQ9 250 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 MYO9AB2RTY4 2548 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 SMIM27A0A1W2PRY6 76 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 DEFB130BP0DP73 79 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 DEFB130AP0DP74 79 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 PRSS57Q6UWY2 283 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 TMEM238C9JI98 176 aa10.76□□□□□ -0.69
C9orf47-203ENST00000375851 ANXA2RQ3ZCQ2 193 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 TDGF1P3P51864 188 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 LINC00158P58513 81 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 STPG4Q8N801 248 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 ELANEP08246 267 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 PAX2Q02962 417 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
C9orf47-203ENST00000375851 SAMD5Q5TGI4 173 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 DENND4AQ7Z401 1863 aa10.75□□□□□ -0.69
C9orf47-203ENST00000375851 DEFB112Q30KQ8 113 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms