RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 ATP5L2Q7Z4Y8 100 aa14.2□□□□□ -0.14
PTPDC1-202ENST00000375360 ACANP16112 2415 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 IGHV7-81A0A0B4J1V7 117 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 PPBPP02775 128 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 GTSCR1Q86UQ5 136 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 DTX2Q86UW9 622 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 SNCGO76070 127 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 PFN1P07737 140 aaKnown RBP14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 SPINK13Q1W4C9 94 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 DEFB113Q30KQ7 82 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 ODF3L1Q8IXM7 274 aa14.19□□□□□ -0.14
PTPDC1-202ENST00000375360 CACNG7P62955 275 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 TCTEX1D4Q5JR98 221 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 TRGV4A0A0C4DH28 118 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 HBDP02042 147 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 C8orf86Q6ZUL3 223 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 UNC80Q8N2C7 3258 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 UBE2CO00762 179 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 RPL13AP40429 203 aaKnown RBP14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 KIAA1549Q9HCM3 1950 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 MEIG1Q5JSS6 88 aa14.18□□□□□ -0.14
PTPDC1-202ENST00000375360 A0A087WWL8 130 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 FXYD5Q96DB9 178 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 TOMM7Q9P0U1 55 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 XCL2Q9UBD3 114 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 LSM4Q9Y4Z0 139 aaKnown RBP14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 J3QLI3 93 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 DAZAP2Q15038 168 aaPredicted RBP14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 RCHY1Q96PM5 261 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 MCRIP2Q9BUT9 160 aaKnown RBP14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 PRORYQ9H606 182 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 TMEM213A2RRL7 107 aa14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 NXT2Q9NPJ8 142 aaKnown RBP14.17□□□□□ -0.14
PTPDC1-202ENST00000375360 TRGV1A0A0A0MS02 117 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 MORN5Q5VZ52 161 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 TRGV11A0A075B6L2 103 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 DEFB136Q30KP8 78 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 THAP8Q8NA92 274 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 LRP4O75096 1905 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 NUP210LQ5VU65 1888 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 IGKV1-17P01599 117 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 SRSF1Q07955 248 aaKnown RBP eCLIP14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 TTC9CQ8N5M4 171 aa14.16□□□□□ -0.14
PTPDC1-202ENST00000375360 KNCNA6PVL3 124 aa14.15□□□□□ -0.14
PTPDC1-202ENST00000375360 H3BRN7 92 aa14.15□□□□□ -0.14
PTPDC1-202ENST00000375360 PLA2G5P39877 138 aa14.15□□□□□ -0.14
PTPDC1-202ENST00000375360 IFI27L1Q96BM0 104 aa14.15□□□□□ -0.14
PTPDC1-202ENST00000375360 TRAV12-2A0A075B6T6 113 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 K7EIM0 57 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 ZNF876PQ49A33 203 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 VGLL1Q99990 258 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 VCX2Q9H322 139 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 MRPL36Q9P0J6 103 aaKnown RBP14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 JOSD1Q15040 202 aaPredicted RBP14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 KLF2Q9Y5W3 355 aaPredicted RBP14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 F6UB75 175 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 Q8N9W7 124 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 TMEM75Q8N9X5 138 aa14.14□□□□□ -0.15
PTPDC1-202ENST00000375360 LINC00587B1AMM8 73 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 NDUFA4O00483 81 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 PRR25Q96S07 402 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 CYSLTR1Q9Y271 337 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 IGKV1OR2-108A0A075B7D4 117 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 CGB3P0DN86 165 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 CGB7P0DN87 165 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 TCF21O43680 179 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 LYRM7Q5U5X0 104 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 BRWD1-AS2P59051 145 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 VPREB3Q9UKI3 123 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 KLK9Q9UKQ9 250 aa14.13□□□□□ -0.15
PTPDC1-202ENST00000375360 LINC01619G3V211 115 aa14.12□□□□□ -0.15
PTPDC1-202ENST00000375360 C3orf56Q8N813 242 aa14.12□□□□□ -0.15
PTPDC1-202ENST00000375360 IFI27P40305 119 aaPredicted RBP14.12□□□□□ -0.15
PTPDC1-202ENST00000375360 CDSNQ15517 529 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 VWC2Q2TAL6 325 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 PYY3Q5JQD4 70 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 PATE2Q6UY27 113 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 C1orf229Q6ZS94 237 aaPredicted RBP14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 TMEM238LA0A1B0GVL6 79 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 A6NJY4 79 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 C1orf194Q5T5A4 169 aa14.11□□□□□ -0.15
PTPDC1-202ENST00000375360 I3L2K1 104 aa14.1□□□□□ -0.15
PTPDC1-202ENST00000375360 MRAP2Q96G30 205 aa14.1□□□□□ -0.15
PTPDC1-202ENST00000375360 GAGE10A6NGK3 116 aa14.1□□□□□ -0.15
PTPDC1-202ENST00000375360 ERASQ7Z444 233 aa14.1□□□□□ -0.15
PTPDC1-202ENST00000375360 DEFB130BP0DP73 79 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 DEFB130AP0DP74 79 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 LMO4P61968 165 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 DPH3P1Q9H4G8 78 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 RNF114Q9Y508 228 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 V9GYV3 84 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 IGLV2-23P01705 113 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 CIRBPQ14011 172 aaKnown RBP14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 COTL1Q14019 142 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 ORMDL2Q53FV1 153 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 ZC2HC1AQ96GY0 325 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 CHCHD5Q9BSY4 110 aa14.09□□□□□ -0.15
PTPDC1-202ENST00000375360 IGHV3-64A0A075B6Q5 118 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms