RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ANXA2RQ3ZCQ2 193 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 PPDPFLQ8WWR9 84 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 TNFRSF6BO95407 300 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 MRGPRG-AS1Q2M3A8 158 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 RPEQ96AT9 228 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 GAFA1Q96PS6 74 aa16.12■□□□□ 0.17
TMEFF1-201ENST00000374879 NDUFA3O95167 84 aa16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 TEX29Q8N6K0 151 aa16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 RAI1Q7Z5J4 1906 aaPredicted RBP16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 TRAV17A0A0B4J275 112 aa16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 LOC107984156A0A0G2JMH3 177 aa16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 ARL17AQ8IVW1 177 aa16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 NXT2Q9NPJ8 142 aaKnown RBP16.11■□□□□ 0.17
TMEFF1-201ENST00000374879 EGR2P11161 476 aaPredicted RBP16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 WT1P19544 449 aaPredicted RBP16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 PROCRQ9UNN8 238 aa16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 ICE1Q9Y2F5 2266 aa16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 LINC01549A6NIU2 74 aa16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 NCBP2LA6PVI3 153 aaKnown RBP16.1■□□□□ 0.17
TMEFF1-201ENST00000374879 PVRIGQ6DKI7 326 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 TEN1Q86WV5 123 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 KIR2DL4Q99706 377 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 CADP27708 2225 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 IGFL2Q6UWQ7 119 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 FAM110AQ9BQ89 295 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 DKK4Q9UBT3 224 aa16.09■□□□□ 0.17
TMEFF1-201ENST00000374879 EP300Q09472 2414 aaPredicted RBP16.08■□□□□ 0.17
TMEFF1-201ENST00000374879 SCNM1Q9BWG6 230 aa16.08■□□□□ 0.16
TMEFF1-201ENST00000374879 TM4SF5O14894 197 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 SLC25A15Q9Y619 301 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 TTC28Q96AY4 2481 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 MYMXA0A1B0GTQ4 84 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 ZNF688P0C7X2 276 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 CCL3L1P16619 93 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 SMIM20Q8N5G0 67 aa16.07■□□□□ 0.16
TMEFF1-201ENST00000374879 LINC01559Q495D7 138 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 A0A087WX48 190 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 K7EM74 188 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 CNIH1O95406 144 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 VMA21Q3ZAQ7 101 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 ZNF575Q86XF7 245 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 CITED1Q99966 193 aa16.06■□□□□ 0.16
TMEFF1-201ENST00000374879 LYPD1Q8N2G4 141 aa16.05■□□□□ 0.16
TMEFF1-201ENST00000374879 MYOZ3Q8TDC0 251 aa16.05■□□□□ 0.16
TMEFF1-201ENST00000374879 SHANK2-AS3Q9BTD1 123 aa16.05■□□□□ 0.16
TMEFF1-201ENST00000374879 IGLC6P0CF74 106 aa16.05■□□□□ 0.16
TMEFF1-201ENST00000374879 RASL11BQ9BPW5 248 aa16.05■□□□□ 0.16
TMEFF1-201ENST00000374879 LINC01619G3V211 115 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 M0R1B8 84 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 ZNF80P51504 273 aaPredicted RBP16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 SEM1Q6ZVN7 128 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 DEFB124Q8NES8 71 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 RNF7Q9UBF6 113 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 IGHV3-72A0A0B4J1Y9 119 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 CCDC179H3BU77 68 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 ENSAO43768 121 aaKnown RBP16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 RPL32P62910 135 aaKnown RBP16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 TMEM30BQ3MIR4 351 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 Q8N8P6 123 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 VCX2Q9H322 139 aa16.04■□□□□ 0.16
TMEFF1-201ENST00000374879 IGLV2-18A0A075B6J9 118 aa16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 RPL27AP46776 148 aaKnown RBP16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 CTSZQ9UBR2 303 aa16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 TRBV20-1A0A075B6N2 111 aa16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 IGKV2-40A0A087WW87 121 aaPredicted RBP16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 IGKV2D-40P01614 121 aaPredicted RBP16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 LGALS1P09382 135 aaKnown RBP16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 MGAQ8IWI9 3026 aa16.03■□□□□ 0.16
TMEFF1-201ENST00000374879 H3BRN7 92 aa16.02■□□□□ 0.16
TMEFF1-201ENST00000374879 IGKV1-17P01599 117 aa16.02■□□□□ 0.16
TMEFF1-201ENST00000374879 UBE2D3P61077 147 aa16.02■□□□□ 0.16
TMEFF1-201ENST00000374879 UBE2D2P62837 147 aa16.02■□□□□ 0.16
TMEFF1-201ENST00000374879 AJUBAQ96IF1 538 aa16.02■□□□□ 0.16
TMEFF1-201ENST00000374879 H3BVH4 76 aa16.02■□□□□ 0.15
TMEFF1-201ENST00000374879 MRPS12O15235 138 aaKnown RBP16.02■□□□□ 0.15
TMEFF1-201ENST00000374879 MAP1BP46821 2468 aaKnown RBP16.02■□□□□ 0.15
TMEFF1-201ENST00000374879 EFNA4P52798 201 aa16.02■□□□□ 0.15
TMEFF1-201ENST00000374879 TCL1BO95988 128 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 PLNP26678 52 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 RHODO00212 210 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 SRD5A1P18405 259 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 CNTFRP26992 372 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 ANKRD29Q8N6D5 301 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 Q8TAT8 98 aa16.01■□□□□ 0.15
TMEFF1-201ENST00000374879 NDUFV3P56181 108 aaKnown RBP16■□□□□ 0.15
TMEFF1-201ENST00000374879 PIP4P1Q86T03 277 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 PRR25Q96S07 402 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 MBD3L4A6NDZ8 208 aaPredicted RBP16■□□□□ 0.15
TMEFF1-201ENST00000374879 MBD3L3A6NE82 208 aaPredicted RBP16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE12JA6NER3 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 MBD3L5A6NJ08 208 aaPredicted RBP16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE7O76087 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 TGFAP01135 160 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE12FP0CL80 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE12GP0CL81 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE12IP0CL82 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 UBE2D1P51668 147 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 GAGE4Q13068 117 aa16■□□□□ 0.15
TMEFF1-201ENST00000374879 MBD3L2Q8NHZ7 208 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms