RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 A0A0J9YX75 114 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 IGLV2-8P01709 118 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 CMC4P56277 68 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 PNRC1Q12796 327 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 COX8CQ7Z4L0 72 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 OR10J6PQ8NGY7 276 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 MLST8Q9BVC4 326 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 SAV1Q9H4B6 383 aaPredicted RBP12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 SDF2L1Q9HCN8 221 aa12.81□□□□□ -0.36
HLA-DMA-201ENST00000374843 A8MTW9 85 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 IGLL1P15814 213 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 DEFB131AP59861 70 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 TMEM241Q24JQ0 296 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 LINC01551Q86U37 167 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 ODF3Q96PU9 254 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 ZFP30Q9Y2G7 519 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 LENEPQ9Y5L5 61 aa12.8□□□□□ -0.36
HLA-DMA-201ENST00000374843 TRBV7-9A0A0J9YWB2 115 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 F6UB75 175 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 PRB4P10163 310 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 ZNF138P52744 262 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 DEFB1P60022 68 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 HIST1H1AQ02539 215 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 ERCC8Q13216 396 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 BAGE2Q86Y30 109 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 SVBPQ8N300 66 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 TVP23CQ96ET8 276 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 SGK494Q96LW2 274 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 C19orf73Q9NVV2 129 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
HLA-DMA-201ENST00000374843 OR11H12B2RN74 326 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 DUSP14O95147 198 aaKnown RBP12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 APOC3P02656 99 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 HLA-DRB4P13762 266 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 RPL23P62829 140 aaKnown RBP12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 SAPCD1Q5SSQ6 148 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 EBLN2Q6P2I7 272 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 Q8TAT8 98 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 FAM19A4Q96LR4 140 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 PRR25Q96S07 402 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 HLA-DRB4X5D2U9 266 aa12.78□□□□□ -0.36
HLA-DMA-201ENST00000374843 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
HLA-DMA-201ENST00000374843 OCC1Q8TAD7 63 aa12.77□□□□□ -0.37
HLA-DMA-201ENST00000374843 CLUHP3Q96NS8 147 aa12.77□□□□□ -0.37
HLA-DMA-201ENST00000374843 K7EN84 100 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 GCGP01275 180 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZNF705DP0CH99 300 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZNF705BP0CI00 300 aaPredicted RBP12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 CT45A10P0DMU9 189 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 ISOC2Q96AB3 205 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 NDFIP1Q9BT67 221 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 DNAH3Q8TD57 4116 aa12.76□□□□□ -0.37
HLA-DMA-201ENST00000374843 H3BMM0 161 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 CD7P09564 240 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 CRISP2P16562 243 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 EGFEM1PQ0D2K5 195 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 ADIRFQ15847 76 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 APRG1Q8IVJ8 170 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 CLRN3Q8NCR9 226 aa12.75□□□□□ -0.37
HLA-DMA-201ENST00000374843 KNCNA6PVL3 124 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 SNAPINO95295 136 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 RHEBQ15382 184 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 AMTNQ6UX39 209 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 NHLRC2Q8NBF2 726 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZC2HC1AQ96GY0 325 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 PKD1L1Q8TDX9 2849 aa12.74□□□□□ -0.37
HLA-DMA-201ENST00000374843 B4DEV8 164 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 M0R036 132 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZNF124Q15973 351 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 ACTL10Q5JWF8 245 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 GTSCR1Q86UQ5 136 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 C8orf49Q96NF6 230 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 ASCL2Q99929 193 aa12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 AURKAIP1Q9NWT8 199 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMA-201ENST00000374843 KLLNB2CW77 178 aa12.72□□□□□ -0.37
HLA-DMA-201ENST00000374843 MGST1P10620 155 aaKnown RBP12.72□□□□□ -0.37
HLA-DMA-201ENST00000374843 SMUG1Q53HV7 270 aa12.72□□□□□ -0.37
HLA-DMA-201ENST00000374843 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
HLA-DMA-201ENST00000374843 TRPT1Q86TN4 253 aaKnown RBP12.72□□□□□ -0.37
HLA-DMA-201ENST00000374843 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 C19orf71A6NCJ1 209 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 LEPP41159 167 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 OR5I1Q13606 314 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 OXLD1Q5BKU9 147 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 SAMD5Q5TGI4 173 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 ZMAT5Q9UDW3 170 aaKnown RBP12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 DNHD1Q96M86 4753 aa12.71□□□□□ -0.37
HLA-DMA-201ENST00000374843 A0A087WWC5 75 aa12.7□□□□□ -0.38
HLA-DMA-201ENST00000374843 PRR9Q5T870 116 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms