RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 ZFHX2Q9C0A1 2572 aaPredicted RBP9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 IGHV2-70P01814 119 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 C1orf159Q96HA4 380 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 PIEZO2Q9H5I5 2752 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 NDPQ00604 133 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 PRIMA1Q86XR5 153 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 TRGV1A0A0A0MS02 117 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 GAFA1Q96PS6 74 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 LIME1Q9H400 295 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 A0A1B0GUS0 222 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 IGLC2P0DOY2 106 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 CT83Q5H943 113 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 IGFL2Q6UWQ7 119 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 SPXQ9BT56 116 aa9.92□□□□□ -0.82
NPLOC4-202ENST00000374747 FCN3O75636 299 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 SHANK2-AS3Q9BTD1 123 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 C9orf118A6NHY6 69 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 KLRD1Q13241 179 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 C9orf153Q5TBE3 101 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 IGFL4Q6B9Z1 124 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 ZNF625Q96I27 306 aaPredicted RBP9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 AKAP6Q13023 2319 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 TRBV20-1A0A075B6N2 111 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 BUB1B-PAK6H3BSN5 160 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 LINC00205P59089 165 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 IGKV1D-17A0A075B6S4 117 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 TMEM219Q86XT9 240 aa9.91□□□□□ -0.82
NPLOC4-202ENST00000374747 TNRC18O15417 2968 aaPredicted RBP9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 H3BMM0 161 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 UBE2WQ96B02 151 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 E7EQL1 145 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 LCNL1Q6ZST4 164 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 TMEM75Q8N9X5 138 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 ZFHX4Q86UP3 3567 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 SRSF8Q9BRL6 282 aaKnown RBP9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 MLANAQ16655 118 aa9.9□□□□□ -0.82
NPLOC4-202ENST00000374747 MUC6Q6W4X9 2439 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 A0A087WWL8 130 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 TRAV13-1A0A0B4J241 112 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 M0R1W7 72 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 SPRY4Q9C004 299 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 FAM215AQ9Y5M1 114 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 GTF3C1Q12789 2109 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 SLAQ13239 276 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 PPDPFLQ8WWR9 84 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 USMG5Q96IX5 58 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 LRP4O75096 1905 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 SPTBN1Q01082 2364 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 LAMA5O15230 3695 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 NPSP0C0P6 89 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 WT1P19544 449 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 IGLV1-44P01699 117 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 IGHV2-5P01817 119 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 FAM104BQ5XKR9 115 aa9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 TSSC4Q9Y5U2 329 aaPredicted RBP9.89□□□□□ -0.83
NPLOC4-202ENST00000374747 TMEM213A2RRL7 107 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 FAM223BA6NKX1 122 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 PRSS46E5RG02 174 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 CFHR2P36980 270 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 Q6ZWC4 215 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 FAM223AQ8IWN6 122 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 GATA4P43694 442 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 YPEL3P61236 119 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 RSPO1Q2MKA7 263 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 C10orf91Q5T1B1 145 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 TRPT1Q86TN4 253 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 MED13Q9UHV7 2174 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 F8W1H4 67 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 F8WEM9 126 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 IGKV1-16P04430 117 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 PLCE1Q9P212 2302 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 INSP01308 110 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 IGHV3-53P01767 116 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 DOCK11Q5JSL3 2073 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 ADGRG4Q8IZF6 3080 aa9.88□□□□□ -0.83
NPLOC4-202ENST00000374747 LYPD6Q86Y78 171 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 Q8N8P6 123 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 INS-IGF2F8WCM5 200 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 K7EP34 96 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 GAGE1Q13065 139 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 TMEM141Q96I45 108 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 TP53TG1Q9Y2A0 90 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 ZNF503-AS2A6NEH8 195 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 LMO1P25800 156 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 C2orf66Q6UXQ4 117 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 Q8TCH9 128 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 C1orf147Q96MC9 270 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 RHPN1-AS1Q9BWJ2 59 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 K7EP13 123 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 SAP30O75446 220 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 C11orf44Q8N8P7 122 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 IGKV1-6A0A0C4DH72 117 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 A0A1W2PPI3 338 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 COX8AP10176 69 aa9.87□□□□□ -0.83
NPLOC4-202ENST00000374747 DMXL1Q9Y485 3027 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 CDK2AP2O75956 126 aa9.86□□□□□ -0.83
NPLOC4-202ENST00000374747 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms