RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 IGKV3D-15A0A087WSY6 115 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 TRAV13-1A0A0B4J241 112 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 TRAV4A0A0B4J268 109 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 ATOX1O00244 68 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 IGKV3-15P01624 115 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 CCL3L1P16619 93 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 Q8N1Y9 231 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 PCNX3Q9H6A9 2034 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 OBSL1O75147 1896 aa8.18□□□□□ -1.1
CD28-202ENST00000374481 UQCRQO14949 82 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 HERVK_113P63121 156 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 Q6ZSR3 168 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 DTX2Q86UW9 622 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 SLC50A1Q9BRV3 221 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 GVINP1Q7Z2Y8 2422 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 Q6ZPA2 131 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 GATD1Q8NB37 220 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 FAM167A-AS1Q96KT0 104 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 TRBV19A0A075B6N1 114 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 IGKV2D-26A0A0A0MRZ7 120 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 TRAV21A0A0B4J279 112 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 SMIM9A6NGZ8 99 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 CFAP126Q5VTH2 177 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 DUX3Q96PT4 197 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 TRGV11A0A075B6L2 103 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 UCNP55089 124 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 ZNF493Q6ZR52 646 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 C14orf178Q8N769 122 aaPredicted RBP8.17□□□□□ -1.1
CD28-202ENST00000374481 DPH3P1Q9H4G8 78 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 LINC00312Q9Y6C7 94 aa8.17□□□□□ -1.1
CD28-202ENST00000374481 PCDH15Q96QU1 1955 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 TRAV26-2A0A0B4J265 109 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 F5H768 121 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 J3QQQ9 107 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 CECR9P0C854 216 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 CRIPAKQ8N1N5 446 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 HES7Q9BYE0 225 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 LINC00527Q9UJ94 153 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 PLXNB1O43157 2135 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 PRRG2O14669 202 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 IGLV2-14P01704 120 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 GGNQ86UU5 652 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 ZNF503Q96F45 646 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 DNAJC30Q96LL9 226 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 SMIM2Q9BVW6 85 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 TNFRSF18Q9Y5U5 241 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 IGKV3D-20A0A0C4DH25 116 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 SRRM5B3KS81 715 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 GATA1P15976 413 aaPredicted RBP8.16□□□□□ -1.1
CD28-202ENST00000374481 PMS2CLQ68D20 193 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 TRPT1Q86TN4 253 aaKnown RBP8.16□□□□□ -1.1
CD28-202ENST00000374481 DTX1Q86Y01 620 aa8.16□□□□□ -1.1
CD28-202ENST00000374481 KMT2EQ8IZD2 1858 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 A0A1B0GX51 115 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 A4D1N5 150 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 S100A7L2Q5SY68 101 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 IGFL4Q6B9Z1 124 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 SHANK2-AS3Q9BTD1 123 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 NDUFA4L2Q9NRX3 87 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 CUL9Q8IWT3 2517 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 MRAPQ8TCY5 172 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 TNCP24821 2201 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 CD28P10747 220 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 SP5Q6BEB4 398 aaPredicted RBP8.15□□□□□ -1.1
CD28-202ENST00000374481 TP53TG1Q9Y2A0 90 aa8.15□□□□□ -1.1
CD28-202ENST00000374481 TRBV10-2A0A0K0K1G8 114 aa8.15□□□□□ -1.11
CD28-202ENST00000374481 PDE6HQ13956 83 aa8.15□□□□□ -1.11
CD28-202ENST00000374481 CRIP3Q6Q6R5 217 aa8.15□□□□□ -1.11
CD28-202ENST00000374481 C1orf210Q8IVY1 113 aa8.15□□□□□ -1.11
CD28-202ENST00000374481 PRR25Q96S07 402 aa8.15□□□□□ -1.11
CD28-202ENST00000374481 VCYO14598 125 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 PLXNA2O75051 1894 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 SS18L1O75177 396 aaPredicted RBP8.14□□□□□ -1.11
CD28-202ENST00000374481 NDUFA7O95182 113 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 FREM1Q5H8C1 2179 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 NCOR1O75376 2440 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 CNTFRP26992 372 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 IMMP1LQ96LU5 166 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 TIMM21Q9BVV7 248 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 NOTCH3Q9UM47 2321 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 CENPVL3A0A0U1RRI6 287 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 C19orf71A6NCJ1 209 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 NDUFA11Q86Y39 141 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 SLC25A45Q8N413 288 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 VPREB3Q9UKI3 123 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 PKDREJQ9NTG1 2253 aa8.14□□□□□ -1.11
CD28-202ENST00000374481 IGKV1OR2-108A0A075B7D4 117 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 LINC00694P0DN24 101 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 ZNF474Q6S9Z5 364 aaPredicted RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 C3orf22Q8N5N4 141 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 ZNF625Q96I27 306 aaPredicted RBP8.13□□□□□ -1.11
CD28-202ENST00000374481 PRSS22Q9GZN4 317 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 WT1-ASQ06250 92 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 Q6ZT83 130 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 DUX5Q96PT3 197 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 TEX49A0A1B0GTD5 131 aa8.13□□□□□ -1.11
CD28-202ENST00000374481 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms