RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 A0A1W2PS18 150 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 GPX1P07203 203 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 Q6ZWC4 215 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 Q96MF0 132 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 TENM4Q6N022 2769 aa13.7□□□□□ -0.22
CTSA-204ENST00000372484 BMI1P35226 326 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 AMTP48728 403 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 RIGQ13278 110 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 KLF5Q13887 457 aaPredicted RBP13.69□□□□□ -0.22
CTSA-204ENST00000372484 SMAD7O15105 426 aaKnown RBP13.69□□□□□ -0.22
CTSA-204ENST00000372484 FSHBP01225 129 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 CD33P20138 364 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 ZNF80P51504 273 aaPredicted RBP13.69□□□□□ -0.22
CTSA-204ENST00000372484 NPFFR1Q9GZQ6 430 aa13.69□□□□□ -0.22
CTSA-204ENST00000372484 PRRC2AP48634 2157 aaKnown RBP13.68□□□□□ -0.22
CTSA-204ENST00000372484 PMCHP20382 165 aa13.68□□□□□ -0.22
CTSA-204ENST00000372484 FAM209BQ5JX69 171 aa13.68□□□□□ -0.22
CTSA-204ENST00000372484 BORCS7Q96B45 105 aa13.68□□□□□ -0.22
CTSA-204ENST00000372484 C16orf92Q96LL3 132 aa13.68□□□□□ -0.22
CTSA-204ENST00000372484 DOPEY2Q9Y3R5 2298 aa13.68□□□□□ -0.22
CTSA-204ENST00000372484 ZNF324O75467 553 aaPredicted RBP13.67□□□□□ -0.22
CTSA-204ENST00000372484 PKIAP61925 76 aa13.67□□□□□ -0.22
CTSA-204ENST00000372484 MRPL53Q96EL3 112 aaKnown RBP13.67□□□□□ -0.22
CTSA-204ENST00000372484 NAGKQ9UJ70 344 aa13.67□□□□□ -0.22
CTSA-204ENST00000372484 VPREB3Q9UKI3 123 aa13.67□□□□□ -0.22
CTSA-204ENST00000372484 PSMB8P28062 276 aa13.67□□□□□ -0.22
CTSA-204ENST00000372484 C9orf139Q6ZV77 190 aa13.67□□□□□ -0.22
CTSA-204ENST00000372484 LOC102724200A0A096LPH7 203 aaPredicted RBP13.66□□□□□ -0.22
CTSA-204ENST00000372484 A0A1B0GW15 77 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 TSTD3H0UI37 97 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 Q6YL49 198 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 IL17RELQ6ZVW7 336 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 PRO1933Q9H354 126 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 TMEM78Q5T7P6 136 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 LYZL1Q6UWQ5 148 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 FAM19A2Q8N3H0 131 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 AGPAT4-IT1Q9H0P7 198 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 CLEC5AQ9NY25 188 aa13.66□□□□□ -0.22
CTSA-204ENST00000372484 PEF1Q9UBV8 284 aaKnown RBP13.66□□□□□ -0.22
CTSA-204ENST00000372484 FABP5P3A8MUU1 101 aa13.65□□□□□ -0.22
CTSA-204ENST00000372484 NRN1Q9NPD7 142 aa13.65□□□□□ -0.22
CTSA-204ENST00000372484 NTF3P20783 257 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 RPS20P60866 119 aaKnown RBP13.64□□□□□ -0.23
CTSA-204ENST00000372484 ZNF664Q8N3J9 261 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 HSBP1O75506 76 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 ORM1P02763 201 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 ZNF138P52744 262 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 SSTP61278 116 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 RPL11P62913 178 aaKnown RBP13.64□□□□□ -0.23
CTSA-204ENST00000372484 CYB5R2Q6BCY4 276 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 RNASEKQ6P5S7 137 aaKnown RBP13.64□□□□□ -0.23
CTSA-204ENST00000372484 C10orf99Q6UWK7 81 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 PRSS57Q6UWY2 283 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 KRTAP1-3Q8IUG1 177 aa13.64□□□□□ -0.23
CTSA-204ENST00000372484 DAZ1Q9NQZ3 744 aaKnown RBP13.64□□□□□ -0.23
CTSA-204ENST00000372484 ZNF705DP0CH99 300 aaPredicted RBP13.63□□□□□ -0.23
CTSA-204ENST00000372484 ZNF705BP0CI00 300 aaPredicted RBP13.63□□□□□ -0.23
CTSA-204ENST00000372484 TM4SF20Q53R12 229 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 HOXA3O43365 443 aaPredicted RBP13.63□□□□□ -0.23
CTSA-204ENST00000372484 C9orf47Q6ZRZ4 202 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 GPHB5Q86YW7 130 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 GATD1Q8NB37 220 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 ZNF738Q8NE65 137 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 RHPN1-AS1Q9BWJ2 59 aa13.63□□□□□ -0.23
CTSA-204ENST00000372484 IGHV7-4-1A0A0J9YVY3 117 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 KRTDAPP60985 99 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 SRSF2Q01130 221 aaKnown RBP13.62□□□□□ -0.23
CTSA-204ENST00000372484 FAM106AQ4KMX7 169 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 NIT1Q86X76 327 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 FER1L6-AS1Q8NA97 138 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 C20orf173Q96LM9 149 aa13.62□□□□□ -0.23
CTSA-204ENST00000372484 TMEM89A2RUT3 159 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 RNF114Q9Y508 228 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 ITPR3Q14573 2671 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 MUC21A0A0G2JKD1 596 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 MUC21A0A140T8X8 626 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 MUC21Q5SSG8 566 aa13.61□□□□□ -0.23
CTSA-204ENST00000372484 NBPF19A0A087WUL8 3843 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 TLN2Q9Y4G6 2542 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 TMEM213A2RRL7 107 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 CTRLP40313 264 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 ZNF493Q6ZR52 646 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 ZNF575Q86XF7 245 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 IGKV3-7A0A075B6H7 116 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 M0QZ24 198 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 M0R2Z0 102 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 SOCS3O14543 225 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 RPLP1P05386 114 aaKnown RBP13.6□□□□□ -0.23
CTSA-204ENST00000372484 DDTP30046 118 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 LINC01559Q495D7 138 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 URB1-AS1Q96HZ7 61 aa13.6□□□□□ -0.23
CTSA-204ENST00000372484 KMT2BQ9UMN6 2715 aaPredicted RBP13.59□□□□□ -0.23
CTSA-204ENST00000372484 IGLC6P0CF74 106 aa13.59□□□□□ -0.23
CTSA-204ENST00000372484 HIST2H2BCQ6DN03 193 aa13.59□□□□□ -0.23
CTSA-204ENST00000372484 ZNF702PQ9H963 129 aa13.59□□□□□ -0.23
CTSA-204ENST00000372484 PPP1R14DQ9NXH3 145 aa13.59□□□□□ -0.23
CTSA-204ENST00000372484 SMPXQ9UHP9 88 aa13.59□□□□□ -0.23
CTSA-204ENST00000372484 K7EMT4 169 aa13.58□□□□□ -0.23
CTSA-204ENST00000372484 HIST1H1AQ02539 215 aaPredicted RBP13.58□□□□□ -0.23
CTSA-204ENST00000372484 TWIST1Q15672 202 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms