RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 CSRP3P50461 194 aa12.44□□□□□ -0.42
COL5A1-201ENST00000371817 A0A087WV48 116 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 MP68P56378 58 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 C17orf100A8MU93 164 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CD24P25063 80 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CMC4P56277 68 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-201ENST00000371817 MUSTN1Q8IVN3 82 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 THAP8Q8NA92 274 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
COL5A1-201ENST00000371817 SPTSSBQ8NFR3 76 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CHCHD2Q9Y6H1 151 aaPredicted RBP12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CELA3BP08861 270 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 ZNF493Q6ZR52 646 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CTSBP07858 339 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 LINC00527Q9UJ94 153 aa12.43□□□□□ -0.42
COL5A1-201ENST00000371817 CYYR1Q96J86 154 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 IGLV3-21P80748 117 aaPredicted RBP12.42□□□□□ -0.42
COL5A1-201ENST00000371817 C15orf62A8K5M9 175 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 ZNF561-AS1K7EIQ3 104 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 CFC1BP0CG36 223 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 CFC1P0CG37 223 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 V9GYV3 84 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 TMEM213A2RRL7 107 aa12.42□□□□□ -0.42
COL5A1-201ENST00000371817 EIF4EBP2Q13542 120 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-201ENST00000371817 PSCAO43653 123 aa12.41□□□□□ -0.42
COL5A1-201ENST00000371817 TIAF1O95411 115 aa12.41□□□□□ -0.42
COL5A1-201ENST00000371817 PRB2P02812 416 aaPredicted RBP12.41□□□□□ -0.42
COL5A1-201ENST00000371817 PCOLCEQ15113 449 aa12.41□□□□□ -0.42
COL5A1-201ENST00000371817 CFHR4Q92496 578 aa12.41□□□□□ -0.42
COL5A1-201ENST00000371817 TIMM23O14925 209 aa12.41□□□□□ -0.42
COL5A1-201ENST00000371817 M0R1W7 72 aa12.4□□□□□ -0.42
COL5A1-201ENST00000371817 FAM168AQ92567 244 aa12.4□□□□□ -0.42
COL5A1-201ENST00000371817 PCNX3Q9H6A9 2034 aa12.4□□□□□ -0.42
COL5A1-201ENST00000371817 Q6ZVH6 145 aa12.4□□□□□ -0.42
COL5A1-201ENST00000371817 FUSP35637 526 aaKnown RBP eCLIP12.4□□□□□ -0.43
COL5A1-201ENST00000371817 SPANXB1Q9NS25 103 aaPredicted RBP12.4□□□□□ -0.43
COL5A1-201ENST00000371817 C8orf31Q8N9H6 132 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 ZNF837Q96EG3 531 aaPredicted RBP12.39□□□□□ -0.43
COL5A1-201ENST00000371817 NLRC5Q86WI3 1866 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 TRBV25-1A0A075B6N4 114 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 THBDP07204 575 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 PRSS22Q9GZN4 317 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 IGHV3-53P01767 116 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 IGKV3D-7A0A0C4DH55 119 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 RNASE2P10153 161 aaKnown RBP12.39□□□□□ -0.43
COL5A1-201ENST00000371817 FOXI1Q12951 378 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 CR1LQ2VPA4 569 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 C7orf69Q9H7B7 122 aa12.39□□□□□ -0.43
COL5A1-201ENST00000371817 TAX1BP3O14907 124 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 CDPF1Q6NVV7 123 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 NDUFS7O75251 213 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 NDPQ00604 133 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 IGHV1-2P23083 117 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 C3orf36Q3SXR2 165 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 C14orf132Q9NPU4 83 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 DKK2Q9UBU2 259 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 FAM231DQ6ZW35 169 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 TECTAO75443 2155 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 A0A0U1RQV1 116 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 IGLC1P0CG04 106 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 HERVK_113P63121 156 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 C8orf49Q96NF6 230 aa12.38□□□□□ -0.43
COL5A1-201ENST00000371817 TRAV3A0A0B4J244 114 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 CFPP27918 469 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 RFPL3SP0C7P2 107 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 VWC2Q2TAL6 325 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 PKIGQ9Y2B9 76 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 ZFP2Q6ZN57 461 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 FGFBP3Q8TAT2 258 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 K7EMI3 77 aa12.37□□□□□ -0.43
COL5A1-201ENST00000371817 SDHAF1A6NFY7 115 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 NTN3O00634 580 aaPredicted RBP12.36□□□□□ -0.43
COL5A1-201ENST00000371817 WFDC2Q14508 124 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 PCP2Q8IVA1 136 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 FOXF2Q12947 444 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 C10orf55Q5SWW7 151 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 IGFBPL1Q8WX77 278 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 SRSF2Q01130 221 aaKnown RBP12.36□□□□□ -0.43
COL5A1-201ENST00000371817 C3orf56Q8N813 242 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 NRXN2Q9P2S2 1712 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 H3BQ85 93 aa12.36□□□□□ -0.43
COL5A1-201ENST00000371817 NDUFV3P56181 108 aaKnown RBP12.35□□□□□ -0.43
COL5A1-201ENST00000371817 CRYGCP07315 174 aa12.35□□□□□ -0.43
COL5A1-201ENST00000371817 MRPS18CQ9Y3D5 142 aaKnown RBP12.35□□□□□ -0.43
COL5A1-201ENST00000371817 ATP6V0E2Q8NHE4 81 aa12.35□□□□□ -0.43
COL5A1-201ENST00000371817 ZSWIM8A7E2V4 1837 aa12.35□□□□□ -0.43
COL5A1-201ENST00000371817 IGLL5B9A064 214 aa12.35□□□□□ -0.43
COL5A1-201ENST00000371817 UBE2DNLQ8IWF7 75 aa12.35□□□□□ -0.43
COL5A1-201ENST00000371817 SPACA3Q8IXA5 215 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 SHANK2-AS3Q9BTD1 123 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 SMIM2Q9BVW6 85 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 H0YJW9 148 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 CRYGBP07316 175 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 DAD1P61803 113 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 ICOSQ9Y6W8 199 aa12.34□□□□□ -0.43
COL5A1-201ENST00000371817 TET2Q6N021 2002 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms