RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PAX9P55771 341 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 Q8NFD4 153 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 WNK1Q9H4A3 2382 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 CCL24O00175 119 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 POU2AF1Q16633 256 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 LINC01559Q495D7 138 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 C6orf226Q5I0X4 101 aa11.7□□□□□ -0.54
NDC1-201ENST00000371429 IGHV1OR15-1A0A075B7D0 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 IGLC1P0CG04 106 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 TMEM95Q3KNT9 176 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE12BA1L429 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 WISP2O76076 250 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE7O76087 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE12FP0CL80 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE12GP0CL81 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE12IP0CL82 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 SSBP2P81877 361 aaPredicted RBP11.69□□□□□ -0.54
NDC1-201ENST00000371429 S100A7L2Q5SY68 101 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 TMEM75Q8N9X5 138 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 SMPXQ9UHP9 88 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE12JA6NER3 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE1Q13065 139 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE4Q13068 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE5Q13069 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 FBXL19-AS1Q494R0 122 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
NDC1-201ENST00000371429 TRAV12-2A0A075B6T6 113 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 HOXD3P31249 432 aaPredicted RBP11.68□□□□□ -0.54
NDC1-201ENST00000371429 PRORYQ9H606 182 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 ZMAT4Q9H898 229 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 H3BRN7 92 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 AZU1P20160 251 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 JPT2Q9H910 190 aa11.68□□□□□ -0.54
NDC1-201ENST00000371429 A0A1B0GUS0 222 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 CXCL1P09341 107 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 DEFB136Q30KP8 78 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 RASL10AQ92737 203 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 SMKR1H3BMG3 65 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 SS18Q15532 418 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 LGALS1P09382 135 aaKnown RBP11.67□□□□□ -0.54
NDC1-201ENST00000371429 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
NDC1-201ENST00000371429 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 LINC00587B1AMM8 73 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 BLCAPP62952 87 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 LINC00518Q8N0U6 118 aa11.67□□□□□ -0.54
NDC1-201ENST00000371429 MRAPQ8TCY5 172 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 FGF23Q9GZV9 251 aaPredicted RBP11.66□□□□□ -0.54
NDC1-201ENST00000371429 PGPEP1Q9NXJ5 209 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 ADAMTS9Q9P2N4 1935 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 OR2K2Q8NGT1 345 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 C8orf49Q96NF6 230 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 SLC25A2Q9BXI2 301 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 HIVEP3Q5T1R4 2406 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 DMRTA1Q5VZB9 504 aa11.66□□□□□ -0.54
NDC1-201ENST00000371429 A8MWV9 139 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 PAX4O43316 350 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 NHP2Q9NX24 153 aaKnown RBP11.65□□□□□ -0.54
NDC1-201ENST00000371429 IGLC7A0M8Q6 106 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 TMEM14CQ9P0S9 112 aa11.65□□□□□ -0.54
NDC1-201ENST00000371429 SFTA2Q6UW10 78 aa11.65□□□□□ -0.55
NDC1-201ENST00000371429 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.55
NDC1-201ENST00000371429 PRR25Q96S07 402 aa11.65□□□□□ -0.55
NDC1-201ENST00000371429 LTBP2Q14767 1821 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 HAPLN4Q86UW8 402 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 FOXE3Q13461 319 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 ZNF491Q8N8L2 437 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 ATP6V0BQ99437 205 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 TNCP24821 2201 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 ABCA2Q9BZC7 2435 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 TYMSP04818 313 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 ANXA2RQ3ZCQ2 193 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
NDC1-201ENST00000371429 THAP8Q8NA92 274 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 FREM1Q5H8C1 2179 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 PAX2Q02962 417 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 KRTAP27-1Q3LI81 207 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 LAMTOR2Q9Y2Q5 125 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 TMEM238C9JI98 176 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 LY6G5BQ8NDX9 201 aa11.63□□□□□ -0.55
NDC1-201ENST00000371429 TRBV25-1A0A075B6N4 114 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 IGHV7-81A0A0B4J1V7 117 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 TMEM213A2RRL7 107 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 TNFRSF6BO95407 300 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 FNDC4Q9H6D8 234 aaPredicted RBP11.62□□□□□ -0.55
NDC1-201ENST00000371429 WIPF3A6NGB9 483 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 C9orf66Q5T8R8 295 aa11.62□□□□□ -0.55
NDC1-201ENST00000371429 PIEZO2Q9H5I5 2752 aa11.61□□□□□ -0.55
NDC1-201ENST00000371429 ZFP36P26651 326 aaKnown RBP11.61□□□□□ -0.55
NDC1-201ENST00000371429 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
NDC1-201ENST00000371429 DYSFO75923 2080 aa11.61□□□□□ -0.55
NDC1-201ENST00000371429 COLCA2A8K830 154 aa11.61□□□□□ -0.55
NDC1-201ENST00000371429 FAM231BA6NCW3 169 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms