RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 S100A13Q99584 98 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 MRPL32Q9BYC8 188 aaKnown RBP2.9□□□□□ -1.95
MCF2-203ENST00000370576 TMEM14CQ9P0S9 112 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 RNF114Q9Y508 228 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 ATRXP46100 2492 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 I3L2K1 104 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 HLA-DRB1P01911 266 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 TPT1P13693 172 aaKnown RBP2.9□□□□□ -1.95
MCF2-203ENST00000370576 PGAM2P15259 253 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 Q6Q795 121 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 C18orf15Q96N68 181 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 PYGO1Q9Y3Y4 419 aa2.9□□□□□ -1.95
MCF2-203ENST00000370576 SYNGR2O43760 224 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGHV4-39P01824 125 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 CRISP2P16562 243 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 GNG4P50150 75 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 MFAP2P55001 183 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 ATOH7Q8N100 152 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 IMMP2LQ96T52 175 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 NAA38Q9BRA0 125 aaKnown RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 SLC25A31Q9H0C2 315 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 GTSF1LQ9H1H1 148 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 FKBP11Q9NYL4 201 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 TP73-AS1Q9UF72 201 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 GON4LQ3T8J9 2241 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 TRGV10A0A0A0MS01 117 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 A0A1B0GV50 99 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 FCN1O00602 326 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 CD5LO43866 347 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 ZNF253O75346 499 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 SIX6O95475 246 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 HSPB1P04792 205 aaKnown RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGLC1P0CG04 106 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 LINC00313P59037 77 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 EIF5AP63241 154 aaKnown RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 HBG1P69891 147 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 HBG2P69892 147 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 HSD52Q0P140 79 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 KIAA0087Q14695 138 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 FAM53AQ6NSI3 398 aaPredicted RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 FAM216BQ8N7L0 139 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 CLDND2Q8NHS1 167 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 GNPNAT1Q96EK6 184 aaPredicted RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 FAM167A-AS1Q96KT0 104 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 AMMECR1Q9Y4X0 333 aaPredicted RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGLV11-55A0A075B6I3 123 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 TRBV7-6A0A0J9YX20 115 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 LINC01546A6NGU7 62 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGLV1-40P01703 118 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGHV4-30-4P0DP06 118 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 CATR1Q13166 79 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 OR51H1Q8NH63 302 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 TRGV9Q99603 122 aa2.89□□□□□ -1.95
MCF2-203ENST00000370576 PRRC2CQ9Y520 2896 aaKnown RBP2.89□□□□□ -1.95
MCF2-203ENST00000370576 IGHV1-3A0A0C4DH29 117 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 A0A0J9YXV3 536 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 A6NDX4 124 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 TNFSF12O43508 249 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 IGKV1D-33P01593 117 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 IGKV1-33P01594 117 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 GPX1P07203 203 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 IL2RGP31785 369 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 RBMXP38159 391 aaKnown RBP2.88□□□□□ -1.95
MCF2-203ENST00000370576 INPP1P49441 399 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 ODF3L2Q3SX64 289 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 LRRC10Q5BKY1 277 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 DEFB108BQ8NET1 73 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 OR10G8Q8NGN5 311 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 DPH3Q96FX2 82 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 ZC2HC1AQ96GY0 325 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 OR2D2Q9H210 308 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 ANKRD11Q6UB99 2663 aaPredicted RBP2.88□□□□□ -1.95
MCF2-203ENST00000370576 TRAV8-4A0A0B4J246 113 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 PSPHP1O15172 72 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 P01737 135 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 SLC25A16P16260 332 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 PPP1CCP36873 323 aaKnown RBP2.88□□□□□ -1.95
MCF2-203ENST00000370576 HERV-K104P61576 105 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 ICAM4Q14773 271 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 FAM19A3Q7Z5A8 133 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 PCP2Q8IVA1 136 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 TMEM147Q9BVK8 224 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 ESM1Q9NQ30 184 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 SVEP1Q4LDE5 3571 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 IGKV1OR2-108A0A075B7D4 117 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 C9JQL5 133 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 NPFFO15130 113 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 GYPAP02724 150 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 INSL3P51460 131 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 AMTNQ6UX39 209 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 TREML4Q6UXN2 200 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 HIST3H2BBQ8N257 126 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 STPG4Q8N801 248 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 MGST2Q99735 147 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 PRO1933Q9H354 126 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 EDA2RQ9HAV5 297 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 WASHC3Q9Y3C0 194 aa2.88□□□□□ -1.95
MCF2-203ENST00000370576 TPRP12270 2363 aaKnown RBP2.88□□□□□ -1.95
MCF2-203ENST00000370576 FOXA3P55318 350 aaPredicted RBP2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms