RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 J3QLI3 93 aa6.84□□□□□ -1.31
ABCA4-201ENST00000370225 LINC00587B1AMM8 73 aa6.84□□□□□ -1.32
ABCA4-201ENST00000370225 MMP23AO75900 390 aa6.84□□□□□ -1.32
ABCA4-201ENST00000370225 ANGP03950 147 aaKnown RBP6.84□□□□□ -1.32
ABCA4-201ENST00000370225 ZNF833PQ6ZTB9 187 aa6.84□□□□□ -1.32
ABCA4-201ENST00000370225 NOP10Q9NPE3 64 aaKnown RBP6.83□□□□□ -1.32
ABCA4-201ENST00000370225 KIF26AQ9ULI4 1882 aaPredicted RBP6.83□□□□□ -1.32
ABCA4-201ENST00000370225 TRBV6-6A0A0A6YYG2 114 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 IGKV1-6A0A0C4DH72 117 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 TNFRSF6BO95407 300 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 POU2AF1Q16633 256 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 DEFB113Q30KQ7 82 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 SNHG12Q9BXW3 62 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 IGKV2D-24A0A075B6R9 120 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 Q6ZQT7 251 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 LY6G5BQ8NDX9 201 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 WT1P19544 449 aaPredicted RBP6.83□□□□□ -1.32
ABCA4-201ENST00000370225 HAPLN4Q86UW8 402 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 TMEM256Q8N2U0 113 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 EDA2RQ9HAV5 297 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 DKK4Q9UBT3 224 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV1OR15-1A0A075B7D0 117 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 LGALS1P09382 135 aaKnown RBP6.83□□□□□ -1.32
ABCA4-201ENST00000370225 ESDP10768 282 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 APRG1Q8IVJ8 170 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 LYPD1Q8N2G4 141 aa6.83□□□□□ -1.32
ABCA4-201ENST00000370225 TRAV25A0A0B4J276 109 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 CCL24O00175 119 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 SEC11AP67812 179 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 TSSC4Q9Y5U2 329 aaPredicted RBP6.82□□□□□ -1.32
ABCA4-201ENST00000370225 Q8TCH9 128 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 ROS1P08922 2347 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.82□□□□□ -1.32
ABCA4-201ENST00000370225 CDKN1BP46527 198 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 GAGE2AQ6NT46 116 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 NDUFA4L2Q9NRX3 87 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 HSD52Q0P140 79 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 C2orf82Q6UX34 121 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 SMPXQ9UHP9 88 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 KLF12Q9Y4X4 402 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 PKDREJQ9NTG1 2253 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 I3L3M4 83 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 ATP6V0BQ99437 205 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 HIST1H2BLQ99880 126 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV4-30-2A0A087WSY4 118 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 PFN1P07737 140 aaKnown RBP6.82□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV4-38-2P0DP08 117 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 SLURP1P55000 103 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 TMEM75Q8N9X5 138 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 SRSF8Q9BRL6 282 aaKnown RBP6.82□□□□□ -1.32
ABCA4-201ENST00000370225 TMEM14BQ9NUH8 114 aa6.82□□□□□ -1.32
ABCA4-201ENST00000370225 C22orf46C9J442 243 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 FGF16O43320 207 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 FOXL2NBQ6ZUU3 175 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 F6UB75 175 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 GAGE2EQ4V326 116 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 PIP4P1Q86T03 277 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 GAGE2DQ9UEU5 116 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 PRSS29PA6NIE9 313 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 SPRNQ5BIV9 151 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 STPG4Q8N801 248 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 TMEM243Q9BU79 118 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 RLFQ13129 1914 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 DOCK11Q5JSL3 2073 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 NDUFA4O00483 81 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 ESM1Q9NQ30 184 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 ADAMTS9Q9P2N4 1935 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 SHISA9B4DS77 424 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 OCIAD2Q56VL3 154 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 NLRC5Q86WI3 1866 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 ZNF524Q96C55 264 aa6.81□□□□□ -1.32
ABCA4-201ENST00000370225 RIF1Q5UIP0 2472 aaKnown RBP6.8□□□□□ -1.32
ABCA4-201ENST00000370225 TANC1Q9C0D5 1861 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 ZNF134P52741 427 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 NCOR1P1Q9H4R4 102 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 VPREB3Q9UKI3 123 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV2-5P01817 119 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 AMBPP02760 352 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 CYYR1Q96J86 154 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 A0A1B0GUS0 222 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 SPRY2O43597 315 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 HLA-DRB4P13762 266 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 ZC2HC1BQ5TFG8 222 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 HLA-DRB4X5D2U9 266 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.8□□□□□ -1.32
ABCA4-201ENST00000370225 GTF3C1Q12789 2109 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 UBE2BP63146 152 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 DEFB105AQ8NG35 78 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 XCL1P47992 114 aa6.8□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV4-61A0A0C4DH41 118 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 IGHV7-4-1A0A0J9YVY3 117 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 LINC01549A6NIU2 74 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 HLA-DMBP28068 263 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 KLF5Q13887 457 aaPredicted RBP6.79□□□□□ -1.32
ABCA4-201ENST00000370225 FHL1Q13642 323 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 PDE6HQ13956 83 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 ANAPC1Q9H1A4 1944 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
ABCA4-201ENST00000370225 TRBV19A0A075B6N1 114 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.5 ms