RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 E9PLN8 166 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 FGF6P10767 208 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 CD177Q8N6Q3 437 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 SMIM2Q9BVW6 85 aa10.14□□□□□ -0.79
HCFC1-202ENST00000369984 TRAV12-2A0A075B6T6 113 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 K7EP13 123 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 IGKV1-5P01602 117 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 PRSS57Q6UWY2 283 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 IL17RELQ6ZVW7 336 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 C9orf118A6NHY6 69 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 TAL2Q16559 108 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 H3BUX3 64 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 PSPNO60542 156 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 CRYGSP22914 178 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 SIGLEC9Q9Y336 463 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 GGNQ86UU5 652 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 IGHG2P01859 326 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
HCFC1-202ENST00000369984 LINC00473A8K010 186 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 IGLV3-19P01714 112 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 LY6DQ14210 128 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 ETDBQ3ZM63 59 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 M0R1W7 72 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 TP53TG1Q9Y2A0 90 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 DEFB130BP0DP73 79 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 DEFB130AP0DP74 79 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 CFHR2P36980 270 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 C8orf49Q96NF6 230 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 ZMAT4Q9H898 229 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 BRD3OSQ6XYD6 125 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 A8MWP6 167 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 DKK1O94907 266 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 LYPD3O95274 346 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 TET2Q6N021 2002 aaPredicted RBP10.12□□□□□ -0.79
HCFC1-202ENST00000369984 PCNX3Q9H6A9 2034 aa10.12□□□□□ -0.79
HCFC1-202ENST00000369984 SLAQ13239 276 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 SPTSSBQ8NFR3 76 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 MSRB2Q9Y3D2 182 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 CRLF1O75462 422 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 SYNJ2BPP57105 145 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 PDE6HQ13956 83 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 RNF5Q99942 180 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 KIAA1671Q9BY89 1806 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 SHISA9B4DS77 424 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 TMEM243Q9BU79 118 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 NAV3Q8IVL0 2385 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 GAS1P54826 345 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 LINC00479Q96M42 142 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 Q86TA4 180 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 KLF5Q13887 457 aaPredicted RBP10.11□□□□□ -0.79
HCFC1-202ENST00000369984 TMEM141Q96I45 108 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 ALPK3Q96L96 1907 aa10.11□□□□□ -0.79
HCFC1-202ENST00000369984 I3L3M4 83 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 DAZ1Q9NQZ3 744 aaKnown RBP10.1□□□□□ -0.79
HCFC1-202ENST00000369984 C15orf62A8K5M9 175 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 FNDC10F2Z333 226 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 PFN2P35080 140 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 POLR3KQ9Y2Y1 108 aaPredicted RBP10.1□□□□□ -0.79
HCFC1-202ENST00000369984 K7ERS5 55 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 ARMS2P0C7Q2 107 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 CFHR3Q02985 330 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 TRBV25-1A0A075B6N4 114 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 OOSP1A8MZH6 123 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 H3BMG7 143 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 EFNA4P52798 201 aa10.1□□□□□ -0.79
HCFC1-202ENST00000369984 MRPL23Q16540 153 aaKnown RBP10.1□□□□□ -0.79
HCFC1-202ENST00000369984 FOXG1P55316 489 aaPredicted RBP10.09□□□□□ -0.79
HCFC1-202ENST00000369984 LINC00205P59089 165 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 RHPN1-AS1Q9BWJ2 59 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 RNF166Q96A37 237 aaPredicted RBP10.09□□□□□ -0.79
HCFC1-202ENST00000369984 C4orf48Q5BLP8 95 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 SCRT2Q9NQ03 307 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 TRAV13-2A0A0B4J235 113 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 FUSP35637 526 aaKnown RBP eCLIP10.09□□□□□ -0.79
HCFC1-202ENST00000369984 MP68P56378 58 aa10.09□□□□□ -0.79
HCFC1-202ENST00000369984 PNRC2Q9NPJ4 139 aaKnown RBP10.09□□□□□ -0.79
HCFC1-202ENST00000369984 Q6P435 159 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 NOTCH4Q99466 2003 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 FLVCR1-AS1Q8TAF5 88 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 GAFA1Q96PS6 74 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 IGKV1-16P04430 117 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 MRPL55Q7Z7F7 128 aaKnown RBP10.08□□□□□ -0.8
HCFC1-202ENST00000369984 SPACA3Q8IXA5 215 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 IGHV3-16A0A0C4DH30 117 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 EFNA2O43921 213 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 B4DSR2 109 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 LYL1P12980 280 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 UBE2BP63146 152 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 C15orf53Q8NAA6 179 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 CEND1Q8N111 149 aa10.08□□□□□ -0.8
HCFC1-202ENST00000369984 DEFB105AQ8NG35 78 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 NDUFB1O75438 58 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 Q0VG73 95 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 CARD19Q96LW7 228 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 SLC25A16P16260 332 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 SAA4P35542 130 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 C20orf204Q6ZNR8 217 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 C5orf24Q7Z6I8 188 aa10.07□□□□□ -0.8
HCFC1-202ENST00000369984 SPATA25Q9BR10 227 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms