RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 ODF3Q96PU9 254 aa7.14□□□□□ -1.27
CLRN3-201ENST00000368671 DNAJC4Q9NNZ3 241 aa7.14□□□□□ -1.27
CLRN3-201ENST00000368671 TRGV2A0A075B6R0 118 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 A0A096LPF7 62 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 A0A1W2PPQ1 181 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 FAM24AA6NFZ4 105 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 CST7O76096 145 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 DAZ2Q13117 558 aaKnown RBP7.13□□□□□ -1.27
CLRN3-201ENST00000368671 GUK1Q16774 197 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 PFDN5Q99471 154 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 SDHCQ99643 169 aaPredicted RBP7.13□□□□□ -1.27
CLRN3-201ENST00000368671 C20orf85Q9H1P6 137 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 GSN-AS1Q9NRJ2 163 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 LRP1BQ9NZR2 4599 aa7.13□□□□□ -1.27
CLRN3-201ENST00000368671 TRGV1A0A0A0MS02 117 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 UBE2L5PA0A1B0GUS4 154 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 C7orf71A4D174 169 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 C5orf51A6NDU8 294 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 M0R3E3 92 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 SLC25A5P05141 298 aaKnown RBP7.12□□□□□ -1.27
CLRN3-201ENST00000368671 IL7P13232 177 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 BTF3P20290 206 aaKnown RBP7.12□□□□□ -1.27
CLRN3-201ENST00000368671 LINC00315P59091 139 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 BAXQ07812 192 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 BTN1A1Q13410 526 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 ZNF680Q8NEM1 530 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 VSIG2Q96IQ7 327 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 RBM38Q9H0Z9 239 aaKnown RBP7.12□□□□□ -1.27
CLRN3-201ENST00000368671 UQCC1Q9NVA1 299 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 WDR83OSQ9Y284 106 aa7.12□□□□□ -1.27
CLRN3-201ENST00000368671 TRBV19A0A075B6N1 114 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 S100A10P60903 97 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 CD300CQ08708 224 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 C12orf45Q8N5I9 185 aaPredicted RBP7.11□□□□□ -1.27
CLRN3-201ENST00000368671 EIF4E3Q8N5X7 224 aaKnown RBP7.11□□□□□ -1.27
CLRN3-201ENST00000368671 C11orf72Q8NBR9 251 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 MRPL53Q96EL3 112 aaKnown RBP7.11□□□□□ -1.27
CLRN3-201ENST00000368671 SEC22CQ9BRL7 303 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 SLC39A9Q9NUM3 307 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 FUT9Q9Y231 359 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 KLF12Q9Y4X4 402 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
CLRN3-201ENST00000368671 APOBP04114 4563 aaKnown RBP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 TRAV6A0A075B6T7 132 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 KRTAP4-8A0A0G2JLE6 195 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 SIVA1O15304 175 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 ZNF253O75346 499 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 IGHV3-53P01767 116 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 PYYP10082 97 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 PVALBP20472 110 aaPredicted RBP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 FGF7P21781 194 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 RNASE4P34096 147 aaKnown RBP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 FUSP35637 526 aaKnown RBP eCLIP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 RPL29P47914 159 aaKnown RBP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 CNPY1Q3B7I2 92 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 EXOC3-AS1Q8N2X6 119 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 BLNKQ8WV28 456 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 LINC00477Q96M19 166 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 AGPAT4-IT1Q9H0P7 198 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 C11orf1Q9H5F2 150 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 MRPL16Q9NX20 251 aaKnown RBP7.1□□□□□ -1.27
CLRN3-201ENST00000368671 PRELID1Q9Y255 219 aa7.1□□□□□ -1.27
CLRN3-201ENST00000368671 IGKV2-40A0A087WW87 121 aaPredicted RBP7.09□□□□□ -1.27
CLRN3-201ENST00000368671 IGSF23A1L1A6 192 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 KLLNB2CW77 178 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 PLA2G10O15496 165 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 SPINK4O60575 86 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 MPDU1O75352 247 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 ZNF324O75467 553 aaPredicted RBP7.09□□□□□ -1.27
CLRN3-201ENST00000368671 NDUFB4O95168 129 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 IGKV2D-40P01614 121 aaPredicted RBP7.09□□□□□ -1.27
CLRN3-201ENST00000368671 GPX1P07203 203 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 HIST1H1EP10412 219 aaKnown RBP7.09□□□□□ -1.27
CLRN3-201ENST00000368671 SULT1A1P50225 295 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 TCL1AP56279 114 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 VWC2Q2TAL6 325 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 TMEM252Q8N6L7 170 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 C2orf50Q96LR7 162 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 C18orf15Q96N68 181 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 LINC00467Q9BRT7 94 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 AAMDCQ9H7C9 122 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 TMEM14CQ9P0S9 112 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 TP53TG3Q9ULZ0 132 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 PLA2G2DQ9UNK4 145 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 ICOSQ9Y6W8 199 aa7.09□□□□□ -1.27
CLRN3-201ENST00000368671 LYRM1O43325 122 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 NXPH4O95158 308 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 TCRBP04435 133 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 S100A11P31949 105 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 HBG1P69891 147 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 HBG2P69892 147 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 RAB32Q13637 225 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 ICAM4Q14773 271 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 GCSAMLQ5JQS6 135 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 TMEM78Q5T7P6 136 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 PRR9Q5T870 116 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 FAM122CQ6P4D5 195 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms