RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 TRAV13-2A0A0B4J235 113 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 SMIM27A0A1W2PRY6 76 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 M0QXV9 152 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 ATP6V0E2Q8NHE4 81 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 UBL5Q9BZL1 73 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 SCN5AQ14524 2016 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 NOTCH3Q9UM47 2321 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 PSPNO60542 156 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 RPL15P61313 204 aaKnown RBP7.21□□□□□ -1.26
SYNE1-209ENST00000367257 WFDC2Q14508 124 aa7.21□□□□□ -1.26
SYNE1-209ENST00000367257 IGHG4P01861 327 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 CFHR2P36980 270 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 NPC2P61916 151 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 A0A1W2PPI3 338 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 ATOX1O00244 68 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 EFNA2O43921 213 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 C12orf74Q32Q52 190 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 PRSS57Q6UWY2 283 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 ZNF833PQ6ZTB9 187 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 PRIMA1Q86XR5 153 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 RMI2Q96E14 147 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 S4R3C0 116 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 VWA8A3KMH1 1905 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 K7EM74 188 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 NDUFV3P56181 108 aaKnown RBP7.2□□□□□ -1.26
SYNE1-209ENST00000367257 PLXNA3P51805 1871 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 TRAV13-1A0A0B4J241 112 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 KNCNA6PVL3 124 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 E9PQ18 207 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 F5H768 121 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.2□□□□□ -1.26
SYNE1-209ENST00000367257 EXOC3-AS1Q8N2X6 119 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 FAM110AQ9BQ89 295 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 NDUFA4L2Q9NRX3 87 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 PTPRQQ9UMZ3 2332 aa7.2□□□□□ -1.26
SYNE1-209ENST00000367257 IGHV3OR16-10A0A075B7F0 116 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 J3QLI3 93 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 UBE2E1P51965 193 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 B3GALT5-AS1P59052 145 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 IL15RAQ13261 267 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 TEN1Q86WV5 123 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 THAP8Q8NA92 274 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 NTN5Q8WTR8 489 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-209ENST00000367257 C3orf56Q8N813 242 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 TRBV19A0A075B6N1 114 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 A4D1N5 150 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 RBAKDNA6NC62 111 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 HLA-DRB4P13762 266 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 RHOHQ15669 191 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 Q6ZUT4 128 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 SPANXB1Q9NS25 103 aaPredicted RBP7.19□□□□□ -1.26
SYNE1-209ENST00000367257 HLA-DRB4X5D2U9 266 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 PLXNA4Q9HCM2 1894 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 FAM236AA0A1B0GUQ0 79 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 FAM236BA0A1B0GV22 79 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 NDUFA4O00483 81 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 HLA-DMBP28068 263 aa7.19□□□□□ -1.26
SYNE1-209ENST00000367257 LINC00473A8K010 186 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 IGLL5B9A064 214 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 KLF5Q13887 457 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-209ENST00000367257 FGFBP3Q8TAT2 258 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 DOCK4Q8N1I0 1966 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 TRAV40A0A0B4J280 105 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 NCR2O95944 276 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 NPYP01303 97 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 TCF15Q12870 199 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 TMEM243Q9BU79 118 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 COL4A2P08572 1712 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 IGKV1D-17A0A075B6S4 117 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 IGHV1-69DA0A0B4J2H0 117 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 RNF152Q8N8N0 203 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 LINC01356Q8N9X3 169 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 RHPN1-AS1Q9BWJ2 59 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 H3BRN7 92 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 LTBRP36941 435 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 HERVK_113P63121 156 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 RSPO4Q2I0M5 234 aaPredicted RBP7.18□□□□□ -1.26
SYNE1-209ENST00000367257 C2orf66Q6UXQ4 117 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
SYNE1-209ENST00000367257 TRGV1A0A0A0MS02 117 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 HOXD3P31249 432 aaPredicted RBP7.17□□□□□ -1.26
SYNE1-209ENST00000367257 Q6ZS92 163 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 PINLYPA6NC86 204 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 KIAA1549LQ6ZVL6 1849 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 CHD3Q12873 2000 aaKnown RBP7.17□□□□□ -1.26
SYNE1-209ENST00000367257 TEX36Q5VZQ5 186 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 F8VRH5 84 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 ZNF493Q6ZR52 646 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 SCRT2Q9NQ03 307 aa7.17□□□□□ -1.26
SYNE1-209ENST00000367257 ATP5G1P05496 136 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 CD59P13987 128 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 PIKFYVEQ9Y2I7 2098 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 DENND4AQ7Z401 1863 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 C14orf178Q8N769 122 aaPredicted RBP7.16□□□□□ -1.26
SYNE1-209ENST00000367257 PRO1854Q9UHT4 67 aa7.16□□□□□ -1.26
SYNE1-209ENST00000367257 V9GYV3 84 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms