RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 SPRY4Q9C004 299 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 SAA1P0DJI8 122 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 LYPD6Q86Y78 171 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ROBO1Q9Y6N7 1651 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 C17orf82Q86X59 251 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 LINC00479Q96M42 142 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 TP53TG3Q9ULZ0 132 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 SIGLEC1Q9BZZ2 1709 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF646O15015 1829 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF80P51504 273 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 TRBV27A0A0K0K1C4 114 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 FXYD3Q14802 87 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 MPDZO75970 2070 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 SCRT2Q9NQ03 307 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 Q6ZUT4 128 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 CHCHD7Q9BUK0 85 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 WDR86Q86TI4 376 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 TRIP12Q14669 1992 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 I3L3M4 83 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ASB16-AS1Q495Z4 193 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ORMDL1Q9P0S3 153 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 C12orf77C9JDV5 145 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 NBR2O15453 112 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 CXCL6P80162 114 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 PSG4Q00888 419 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 RPL36AP83881 106 aaKnown RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 RPL36ALQ969Q0 106 aaKnown RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 VWCEQ96DN2 955 aa3.02□□□□□ -1.93
SYNE1-207ENST00000367255 OPRPNQ99935 248 aaPredicted RBP3.02□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF329Q86UD4 541 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 CADP27708 2225 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 CFC1BP0CG36 223 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 CFC1P0CG37 223 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 SHISA3A0PJX4 238 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 CCDC179H3BU77 68 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 HIST1H4AP62805 103 aaKnown RBP3.01□□□□□ -1.93
SYNE1-207ENST00000367255 NUP214P35658 2090 aaPredicted RBP3.01□□□□□ -1.93
SYNE1-207ENST00000367255 GATA2P23769 480 aaPredicted RBP3.01□□□□□ -1.93
SYNE1-207ENST00000367255 HIGD2AQ9BW72 106 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV2D-26A0A0A0MRZ7 120 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 SERP1Q9Y6X1 66 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFA4O00483 81 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 KLK15Q9H2R5 256 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 FOXS1O43638 330 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 TUBGCP6Q96RT7 1819 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 PAQR4Q8N4S7 273 aaPredicted RBP3.01□□□□□ -1.93
SYNE1-207ENST00000367255 ETDBQ3ZM63 59 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV1D-16P01601 117 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 Q8N7P7 452 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 LYZP61626 148 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 HIST2H2BCQ6DN03 193 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 HIST2H2BDQ6DRA6 164 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 NOTCH3Q9UM47 2321 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 GFRALQ6UXV0 394 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 MED13LQ71F56 2210 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 A0A1B0GXF2 115 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 IBA57-AS1B1ANH7 110 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 TOMM6Q96B49 74 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 UBE2D4Q9Y2X8 147 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 IGHV1-3A0A0C4DH29 117 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 SSC4DQ8WTU2 575 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 DOT1LQ8TEK3 1739 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 COX7A2LO14548 114 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 MDFICQ9P1T7 246 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 NDUFA12Q9UI09 145 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 QSER1Q2KHR3 1735 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 A0A0U1RRA0 63 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 CECR9P0C854 216 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 SPTBP11277 2137 aa3.01□□□□□ -1.93
SYNE1-207ENST00000367255 K7ERS5 55 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 RS1O15537 224 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV3-15P01624 115 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 K7EMT4 169 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 IGFL3Q6UXB1 125 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 UBR2Q8IWV8 1755 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 E9PLN8 166 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 P0C879 139 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 TDRG1Q3Y452 100 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 SS18L2Q9UHA2 77 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ZMAT4Q9H898 229 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ITGB4P16144 1822 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 SCN10AQ9Y5Y9 1956 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ARFGEF3Q5TH69 2177 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ZNF876PQ49A33 203 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 RALGAPA1Q6GYQ0 2036 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 YLPM1P49750 1951 aaKnown RBP3□□□□□ -1.93
SYNE1-207ENST00000367255 IGKV1-8A0A0C4DH67 115 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 LGALS9O00182 355 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ZC2HC1BQ5TFG8 222 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 CD177Q8N6Q3 437 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 SRSF12Q8WXF0 261 aaKnown RBP3□□□□□ -1.93
SYNE1-207ENST00000367255 C6orf226Q5I0X4 101 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 TMEM133Q9H2Q1 129 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 TRBV25-1A0A075B6N4 114 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 PRR25Q96S07 402 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 PI4KAP42356 2102 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 ARHGEF17Q96PE2 2063 aaPredicted RBP3□□□□□ -1.93
SYNE1-207ENST00000367255 NSUN5P1Q3KNT7 163 aa3□□□□□ -1.93
SYNE1-207ENST00000367255 LIMD2Q9BT23 127 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms