RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 LINC00477Q96M19 166 aa6.68□□□□□ -1.34
MRPL55-216ENST00000366744 PSMG3Q9BT73 122 aaPredicted RBP6.68□□□□□ -1.34
MRPL55-216ENST00000366744 TRAV12-3A0A0B4J271 114 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 C7orf71A4D174 169 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 GPX1P07203 203 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 DEFB130BP0DP73 79 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 DEFB130AP0DP74 79 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 RAB2AP61019 212 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 RANP62826 216 aaKnown RBP6.67□□□□□ -1.34
MRPL55-216ENST00000366744 NDUFA5Q16718 116 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 UBE2DNLQ8IWF7 75 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 ZNF680Q8NEM1 530 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 OR2G3Q8NGZ4 309 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 FAM210BQ96KR6 192 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 PYGO2Q9BRQ0 406 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 Q9H3A6 140 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 WFDC1Q9HC57 220 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 RPH3ALQ9UNE2 315 aa6.67□□□□□ -1.34
MRPL55-216ENST00000366744 TIMM8BQ9Y5J9 83 aaPredicted RBP6.67□□□□□ -1.34
MRPL55-216ENST00000366744 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
MRPL55-216ENST00000366744 SACSQ9NZJ4 4579 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 IGKV2-40A0A087WW87 121 aaPredicted RBP6.66□□□□□ -1.34
MRPL55-216ENST00000366744 RBAKDNA6NC62 111 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 CBY3A6NI87 242 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 K7EQM0 130 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 RGS13O14921 159 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ARPC5O15511 151 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 IGKV2D-40P01614 121 aaPredicted RBP6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ATP5G1P05496 136 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ARL14EPLP0DKL9 152 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 P0DMU3 169 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 FAM231AP0DMU4 169 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 FAM231CP0DMU5 169 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 CT45A10P0DMU9 189 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ATP6V0CP27449 155 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ATP5G3P48201 142 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 SERF2P84101 59 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 C9orf47Q6ZRZ4 202 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 IQCF2Q8IXL9 164 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 HYLS1Q96M11 299 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 ARPC5LQ9BPX5 153 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 OTORQ9NRC9 128 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 TNFSF18Q9UNG2 199 aa6.66□□□□□ -1.34
MRPL55-216ENST00000366744 TAAR5O14804 337 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 NMBP08949 121 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 RNASE4P34096 147 aaKnown RBP6.65□□□□□ -1.34
MRPL55-216ENST00000366744 ZNF138P52744 262 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 ERCC8Q13216 396 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 AKR1C8PQ5T2L2 129 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 RNASE8Q8TDE3 154 aaKnown RBP6.65□□□□□ -1.34
MRPL55-216ENST00000366744 NDFIP1Q9BT67 221 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 ACTR3CQ9C0K3 210 aaPredicted RBP6.65□□□□□ -1.34
MRPL55-216ENST00000366744 TMEM167BQ9NRX6 74 aa6.65□□□□□ -1.34
MRPL55-216ENST00000366744 TRBV7-9A0A0J9YWB2 115 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 RNF222A6NCQ9 220 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 KLLNB2CW77 178 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 HMGB3O15347 200 aaKnown RBP6.64□□□□□ -1.35
MRPL55-216ENST00000366744 CXorf1O96002 111 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 CRISP2P16562 243 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 BTN1A1Q13410 526 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 ZFP69Q49AA0 526 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 C15orf53Q8NAA6 179 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 Q8TAT8 98 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 NOP10Q9NPE3 64 aaKnown RBP6.64□□□□□ -1.35
MRPL55-216ENST00000366744 APLNQ9ULZ1 77 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 DNAH1Q9P2D7 4330 aa6.64□□□□□ -1.35
MRPL55-216ENST00000366744 SERTM2A0A1B0GWG4 89 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 DIRC3C9JPN6 131 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 F5H768 121 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 AZU1P20160 251 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 RPL7L1Q6DKI1 246 aaKnown RBP6.63□□□□□ -1.35
MRPL55-216ENST00000366744 GOLT1AQ6ZVE7 132 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 EIF4E3Q8N5X7 224 aaKnown RBP6.63□□□□□ -1.35
MRPL55-216ENST00000366744 TMED6Q8WW62 240 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 RAB24Q969Q5 203 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 ZNF503Q96F45 646 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 VGLL1Q99990 258 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 AGPAT4-IT1Q9H0P7 198 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 SH3BGRL3Q9H299 93 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 ZNF492Q9P255 531 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 HYDINQ4G0P3 5121 aa6.63□□□□□ -1.35
MRPL55-216ENST00000366744 TRGV2A0A075B6R0 118 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 PGPA6NDG6 321 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 EIF3GO75821 320 aaKnown RBP eCLIP6.62□□□□□ -1.35
MRPL55-216ENST00000366744 PRM2P04554 102 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 STAG3L2P0CL84 134 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 GCHFRP30047 84 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 ZNF415Q09FC8 603 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 ZNF345Q14585 488 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 KIR3DS1Q14943 382 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 Q5BKY6 102 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 TMEM88Q6PEY1 159 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 C5orf17Q8NAS9 161 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 ATG101Q9BSB4 218 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 LENEPQ9Y5L5 61 aa6.62□□□□□ -1.35
MRPL55-216ENST00000366744 NACAE9PAV3 2078 aa6.61□□□□□ -1.35
MRPL55-216ENST00000366744 TRGV11A0A075B6L2 103 aa6.61□□□□□ -1.35
MRPL55-216ENST00000366744 IGHV1OR15-1A0A075B7D0 117 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms