RNA–Protein interactions for RNA: ENST00000365510.1

RNU1-55P-201, Transcript of RNA, U1 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU1-55P, Length 158 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-55P-201ENST00000365510 C9JQL5 133 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 GNG4P50150 75 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 DEFB131AP59861 70 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 TMEM183BQ1AE95 376 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 ZNF674Q2M3X9 581 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 ODF3L2Q3SX64 289 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 FAM74A3Q4VXF1 159 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 TMEM78Q5T7P6 136 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 Q86TA4 180 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 OR8A1Q8NGG7 326 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 WWC2-AS2Q96NR7 200 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 PRR25Q96S07 402 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 SMIM7Q9BQ49 75 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 NIPSNAP3BQ9BS92 247 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 NDFIP1Q9BT67 221 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 DERL1Q9BUN8 251 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 KRTAP17-1Q9BYP8 105 aa5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 SAV1Q9H4B6 383 aaPredicted RBP5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 HUWE1Q7Z6Z7 4374 aaKnown RBP5.04□□□□□ -1.6
RNU1-55P-201ENST00000365510 SORL1Q92673 2214 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 TRAV8-1A0A0A6YYK1 113 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 TRAV34A0A0B4J273 112 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 A0A0J9YX75 114 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 TMEM218A2RU14 115 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 ZNF727A8MUV8 499 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 KRBOX1C9JBD0 128 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 C9JCJ5 164 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 PRAC2D3DTV9 90 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 NPIPB6E9PJ23 425 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 F8W036 122 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 DUSP14O95147 198 aaKnown RBP5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 HLA-DRB4P13762 266 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 TAS2R60P59551 318 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 FLI1Q01543 452 aaPredicted RBP5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 CENPWQ5EE01 88 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 ACTL10Q5JWF8 245 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 C9orf47Q6ZRZ4 202 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 PRNTQ86SH4 94 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 SMIM12Q96EX1 92 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 VGLL1Q99990 258 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 PPP1R14DQ9NXH3 145 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 KLF12Q9Y4X4 402 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 HLA-DRB4X5D2U9 266 aa5.03□□□□□ -1.6
RNU1-55P-201ENST00000365510 TRBV6-1A0A0K0K1D8 114 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 KNCNA6PVL3 124 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 F6UB75 175 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 LTAP01374 205 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 IGLV2-11P01706 119 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 CD7P09564 240 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 CT45A10P0DMU9 189 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 PRB4P10163 310 aaPredicted RBP5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 ADCYAP1P18509 176 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZNF138P52744 262 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 EGFEM1PQ0D2K5 195 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 SAPCD1Q5SSQ6 148 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 BAGE2Q86Y30 109 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 APRG1Q8IVJ8 170 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 STHQ8IWL8 128 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 OR4B1Q8NGF8 309 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 Q8TAT8 98 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 SGK494Q96LW2 274 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 IGF2BP2-AS1Q96M15 143 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 LINC00477Q96M19 166 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 LINC00479Q96M42 142 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 ODF3Q96PU9 254 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 SEC11CQ9BY50 192 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 NAT8Q9UHE5 227 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 PSG8Q9UQ74 426 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZFP30Q9Y2G7 519 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 LENEPQ9Y5L5 61 aa5.02□□□□□ -1.61
RNU1-55P-201ENST00000365510 TRBV7-9A0A0J9YWB2 115 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 IGKV3-20P01619 116 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZNF705DP0CH99 300 aaPredicted RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZNF705BP0CI00 300 aaPredicted RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 MGST1P10620 155 aaKnown RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 TSPOP30536 169 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 LEPP41159 167 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 DEFB1P60022 68 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 NUTF2P61970 127 aaKnown RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 PNRC1Q12796 327 aaPredicted RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 ERCC8Q13216 396 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 TMEM241Q24JQ0 296 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 GDF5OSQ5U4N7 250 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 TMEM183AQ8IXX5 376 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 B9D2Q9BPU9 175 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 AGPAT4-IT1Q9H0P7 198 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 BIN3Q9NQY0 253 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZNF492Q9P255 531 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 CARHSP1Q9Y2V2 147 aaKnown RBP5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 LY96Q9Y6Y9 160 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 U3KQK5 164 aa5.01□□□□□ -1.61
RNU1-55P-201ENST00000365510 TRBV20OR9-2A0A075B6H5 130 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 H3BMM0 161 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 M0R036 132 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 ATP6V1G1O75348 118 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 ADIRFQ15847 76 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZNF124Q15973 351 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 SMUG1Q53HV7 270 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 C10orf91Q5T1B1 145 aa5□□□□□ -1.61
RNU1-55P-201ENST00000365510 ZFAND6Q6FIF0 208 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms