RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ZNF625Q96I27 306 aaPredicted RBP8.76□□□□□ -1.01
CLIP1-203ENST00000361654 NDUFA4L2Q9NRX3 87 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 HEATR1Q9H583 2144 aaKnown RBP8.76□□□□□ -1.01
CLIP1-203ENST00000361654 DOCK4Q8N1I0 1966 aa8.76□□□□□ -1.01
CLIP1-203ENST00000361654 LY6G6EA0A0G2JKS1 128 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 MRPL23Q16540 153 aaKnown RBP8.75□□□□□ -1.01
CLIP1-203ENST00000361654 Q8NFD4 153 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 U3KQA8 63 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 C5orf63A6NC05 138 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 ATP5G1P05496 136 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 INAFM2P0DMQ5 153 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 TM2D2Q9BX73 214 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 Q9HAA7 133 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 PLA2G5P39877 138 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 NOTCH3Q9UM47 2321 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 A0A096LPF7 62 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
CLIP1-203ENST00000361654 PKDREJQ9NTG1 2253 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 NXPH4O95158 308 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 HLA-DRB4P13762 266 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 CT83Q5H943 113 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 SAMD5Q5TGI4 173 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 AMN1Q8IY45 258 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 HLA-DRB4X5D2U9 266 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 TRAV12-2A0A075B6T6 113 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 A0A0J9YY99 117 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 DLEU1O43261 78 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 Q6ZWC4 215 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 LINC01551Q86U37 167 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 C4orf48Q5BLP8 95 aa8.74□□□□□ -1.01
CLIP1-203ENST00000361654 TRBV19A0A075B6N1 114 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 TRAV8-3A0A0A6YYJ7 113 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 SDHAF1A6NFY7 115 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 C9JQL5 133 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 FAM120AOSQ5T036 256 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 PYGO2Q9BRQ0 406 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF492Q9P255 531 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.73□□□□□ -1.016e-7■■■■■ 33
CLIP1-203ENST00000361654 PCNX1Q96RV3 2341 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 TRAV25A0A0B4J276 109 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 SOCS3O14543 225 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 Q6ZR03 302 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF493Q6ZR52 646 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 BCL6BQ8N143 479 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-203ENST00000361654 FNDC4Q9H6D8 234 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-203ENST00000361654 KIF26BQ2KJY2 2108 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 SIP14410 1827 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF134P52741 427 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 MLANAQ16655 118 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 CITED2Q99967 270 aaPredicted RBP8.73□□□□□ -1.01
CLIP1-203ENST00000361654 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 FAM231BA6NCW3 169 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 ZC2HC1BQ5TFG8 222 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF503Q96F45 646 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 SCRT2Q9NQ03 307 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 RALGAPA2Q2PPJ7 1873 aa8.73□□□□□ -1.01
CLIP1-203ENST00000361654 LCTP09848 1927 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 TRBV24-1A0A075B6N3 115 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 ETV2O00321 342 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-203ENST00000361654 MYCNOSP40205 109 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 C2orf66Q6UXQ4 117 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 ZNF664Q8N3J9 261 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 NOP10Q9NPE3 64 aaKnown RBP8.72□□□□□ -1.01
CLIP1-203ENST00000361654 WNK2Q9Y3S1 2297 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 PRSS46E5RG02 174 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 HERVK_113P63121 156 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 DAZAP2Q15038 168 aaPredicted RBP8.72□□□□□ -1.01
CLIP1-203ENST00000361654 MRPL53Q96EL3 112 aaKnown RBP8.72□□□□□ -1.01
CLIP1-203ENST00000361654 C8orf49Q96NF6 230 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 IGHV4-61A0A0C4DH41 118 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 IGKV1-39P01597 117 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 IGKV1D-39P04432 117 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 ZNRD1Q9P1U0 126 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 A0A1B0GW64 132 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 RNF152Q8N8N0 203 aa8.72□□□□□ -1.01
CLIP1-203ENST00000361654 IGHV4-30-2A0A087WSY4 118 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 SMKR1H3BMG3 65 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 HOXB4P17483 251 aaPredicted RBP8.71□□□□□ -1.01
CLIP1-203ENST00000361654 LINC00205P59089 165 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 C17orf58Q2M2W7 97 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 CLPSL1A2RUU4 121 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 C10orf91Q5T1B1 145 aa8.71□□□□□ -1.01
CLIP1-203ENST00000361654 SHISA9B4DS77 424 aa8.71□□□□□ -1.02
CLIP1-203ENST00000361654 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.02
CLIP1-203ENST00000361654 MEGF9Q9H1U4 602 aa8.71□□□□□ -1.02
CLIP1-203ENST00000361654 GUSBP1Q15486 140 aa8.71□□□□□ -1.02
CLIP1-203ENST00000361654 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.02
CLIP1-203ENST00000361654 SCN5AQ14524 2016 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 H3BRN7 92 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 C16orf74Q96GX8 76 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 TMEM14CQ9P0S9 112 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 PI4KAP42356 2102 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 MYLKQ15746 1914 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 CD5LO43866 347 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 TIRAPP58753 221 aa8.7□□□□□ -1.02
CLIP1-203ENST00000361654 GAGE2AQ6NT46 116 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms