RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 DAZ1Q9NQZ3 744 aaKnown RBP10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 NUPR1O60356 82 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 TMEM243Q9BU79 118 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 XIRP1Q702N8 1843 aaKnown RBP10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 NDUFB8O95169 186 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 BAALC-AS2P0C853 105 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 VOPP1Q96AW1 172 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 PDCD11Q14690 1871 aaKnown RBP10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 POU2AF1Q16633 256 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 C5orf47Q569G3 176 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 SSC4DQ8WTU2 575 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 PATJQ8NI35 1801 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 TRBV25-1A0A075B6N4 114 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 OVOL3O00110 214 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 PYGO2Q9BRQ0 406 aa10.74□□□□□ -0.69
CCDC144A-203ENST00000360495 TRAV26-1A0A087WT03 109 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 ZNF883P0CG24 379 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 TMEM14CQ9P0S9 112 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 IGHV3-16A0A0C4DH30 117 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 CFHR1Q03591 330 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 KIAA2026Q5HYC2 2103 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 M0R1W7 72 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 WFDC2Q14508 124 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 FXYD5Q96DB9 178 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 KLK9Q9UKQ9 250 aa10.73□□□□□ -0.69
CCDC144A-203ENST00000360495 FAM236AA0A1B0GUQ0 79 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 FAM236BA0A1B0GV22 79 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 DOCK10Q96BY6 2186 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 H3BUX3 64 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 HOXD3P31249 432 aaPredicted RBP10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 IL15RAQ13261 267 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 PIP4P2Q8N4L2 257 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 ARID2Q68CP9 1835 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 LYPD2Q6UXB3 125 aa10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 COL11A2P13942 1736 aaPredicted RBP10.72□□□□□ -0.69
CCDC144A-203ENST00000360495 BRWD3Q6RI45 1802 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 H3BRN7 92 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 NBL1P41271 181 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 SPINK13Q1W4C9 94 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 NSUN5P1Q3KNT7 163 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 FAM120AOSQ5T036 256 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 COL4A5P29400 1685 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 IGHV3-38A0A0C4DH36 116 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 E9PQ18 207 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 TAX1BP3O14907 124 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 TEN1Q86WV5 123 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 ATOX1O00244 68 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 LTAP01374 205 aa10.71□□□□□ -0.69
CCDC144A-203ENST00000360495 ANKRD39Q53RE8 183 aa10.71□□□□□ -0.7
CCDC144A-203ENST00000360495 MED12Q93074 2177 aa10.71□□□□□ -0.7
CCDC144A-203ENST00000360495 DEFB130BP0DP73 79 aa10.71□□□□□ -0.7
CCDC144A-203ENST00000360495 DEFB130AP0DP74 79 aa10.71□□□□□ -0.7
CCDC144A-203ENST00000360495 DEFB131AP59861 70 aa10.71□□□□□ -0.7
CCDC144A-203ENST00000360495 A0A1B0GX51 115 aa10.7□□□□□ -0.7
CCDC144A-203ENST00000360495 CR1LQ2VPA4 569 aa10.7□□□□□ -0.7
CCDC144A-203ENST00000360495 BRD3OSQ6XYD6 125 aa10.7□□□□□ -0.7
CCDC144A-203ENST00000360495 CSRP2Q16527 193 aa10.7□□□□□ -0.7
CCDC144A-203ENST00000360495 MRPL23Q16540 153 aaKnown RBP10.7□□□□□ -0.7
CCDC144A-203ENST00000360495 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 G3V4G9 280 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 PRB1P04280 392 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 LINC00173Q6ZV60 143 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 COLQQ9Y215 455 aaPredicted RBP10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 hADV29S1A0JD25 119 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 LMO1P25800 156 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 FANCMQ8IYD8 2048 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 PRSS47A8MTI9 375 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 HERVK_113P63121 156 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 ZFP36L1Q07352 338 aaKnown RBP10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 C3orf56Q8N813 242 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 LOC285556D6RIA3 1793 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 LINC01545Q5VT33 79 aa10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 RBBP6Q7Z6E9 1792 aaKnown RBP10.69□□□□□ -0.7
CCDC144A-203ENST00000360495 ZNF561-AS1K7EIQ3 104 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 FOXI1Q12951 378 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 RNASE13Q5GAN3 156 aaKnown RBP10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 ZNRF2Q8NHG8 242 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PARP14Q460N5 1801 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 CRYGCP07315 174 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 B3GALT5-AS1P59052 145 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 FAM110DQ8TAY7 271 aaPredicted RBP10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 ORMDL1Q9P0S3 153 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PRR20EP86478 221 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PRR20CP86479 221 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PRR20DP86480 221 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PRR20BP86481 221 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 PRR20AP86496 221 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 NCOR1O75376 2440 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 K7EM74 188 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 FXYD2P54710 66 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 WT1-ASQ06250 92 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 POLEQ07864 2286 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 K7EMI3 77 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 NKAPP1Q8N9T2 125 aa10.68□□□□□ -0.7
CCDC144A-203ENST00000360495 A0A0G2JMZ2 1700 aa10.67□□□□□ -0.7
CCDC144A-203ENST00000360495 LRRC37A2A6NM11 1700 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms