RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 KLF5Q13887 457 aaPredicted RBP10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 AMTNQ6UX39 209 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 NDUFS5O43920 106 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 LYZL4Q96KX0 146 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 RPL35AP18077 110 aaKnown RBP10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 CFHR2P36980 270 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 LHFPL1Q86WI0 220 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
SRGAP3-201ENST00000360413 LRRC37AA6NMS7 1700 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 CCL25O15444 150 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 CD24P25063 80 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 SMIM2Q9BVW6 85 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 A0A0G2JMZ2 1700 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 LRRC37A2A6NM11 1700 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 CTSBP07858 339 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 TMEM14EPQ6UXP3 125 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 NMSQ5H8A3 153 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 TECTAO75443 2155 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 TRAV25A0A0B4J276 109 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 NDUFB1O75438 58 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 LYL1P12980 280 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 HIVEP2P31629 2446 aa10.76□□□□□ -0.69
SRGAP3-201ENST00000360413 K7EMI3 77 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 PRB1P04280 392 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 CELA3BP08861 270 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 C4orf48Q5BLP8 95 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 NUP210Q8TEM1 1887 aaPredicted RBP10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 TINCRA0A1B0GVN0 87 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 LINC00114Q6XXX2 140 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 TP53TG1Q9Y2A0 90 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 A0A087WWL8 130 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 F5H768 121 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 ARMS2P0C7Q2 107 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 SHISA9B4DS77 424 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 IGHV1-8P0DP01 117 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 CFHR1Q03591 330 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 TMEM75Q8N9X5 138 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 VWC2Q2TAL6 325 aa10.75□□□□□ -0.69
SRGAP3-201ENST00000360413 KIAA1671Q9BY89 1806 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 C9JQL5 133 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 PCDH15Q96QU1 1955 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 IGLV3-19P01714 112 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 WBP1Q96G27 269 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 SRRM5B3KS81 715 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 NTF4P34130 210 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 CLPSL1A2RUU4 121 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 BRK1Q8WUW1 75 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 ZNF837Q96EG3 531 aaPredicted RBP10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 NBL1P41271 181 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 CSRP3P50461 194 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 TAL2Q16559 108 aa10.74□□□□□ -0.69
SRGAP3-201ENST00000360413 SIPA1L1O43166 1804 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 HERVK_113P63121 156 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 MESP1Q9BRJ9 268 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 TFF1P04155 84 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 IGHV1-3A0A0C4DH29 117 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 LINC00479Q96M42 142 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 COL11A2P13942 1736 aaPredicted RBP10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 IGHG2P01859 326 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 DKK4Q9UBT3 224 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 MP68P56378 58 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 LGALS9BQ3B8N2 356 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
SRGAP3-201ENST00000360413 J3QLI3 93 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 SIVA1O15304 175 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 RFPL3SP0C7P2 107 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 FOXG1P55316 489 aaPredicted RBP10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 MRPL23Q16540 153 aaKnown RBP10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 Q86TA4 180 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 NTN5Q8WTR8 489 aaPredicted RBP10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 C12orf74Q32Q52 190 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 PFN1P07737 140 aaKnown RBP10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 UBE2BP63146 152 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 MST1LQ2TV78 715 aa10.72□□□□□ -0.69
SRGAP3-201ENST00000360413 IGKV1-5P01602 117 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 A0A1W2PPI3 338 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 H3BUX3 64 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 SPATA25Q9BR10 227 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 IGHV2-70DA0A0C4DH43 119 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 TMEM178BH3BS89 294 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 IGHV3-53P01767 116 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 DEFB130BP0DP73 79 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 DEFB130AP0DP74 79 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 KLRD1Q13241 179 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 BUB1B-PAK6H3BSN5 160 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 ACYP1P07311 99 aa10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 ZNF672Q499Z4 452 aaPredicted RBP10.71□□□□□ -0.69
SRGAP3-201ENST00000360413 PLXNA4Q9HCM2 1894 aa10.71□□□□□ -0.7
SRGAP3-201ENST00000360413 C9orf106Q8NAJ2 232 aa10.71□□□□□ -0.7
SRGAP3-201ENST00000360413 PFN2P35080 140 aa10.71□□□□□ -0.7
SRGAP3-201ENST00000360413 IGLV3-12A0A075B6K2 115 aa10.71□□□□□ -0.7
SRGAP3-201ENST00000360413 TMEM213A2RRL7 107 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 RNF152Q8N8N0 203 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 Q8N8P6 123 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 FAM236AA0A1B0GUQ0 79 aa10.7□□□□□ -0.7
SRGAP3-201ENST00000360413 FAM236BA0A1B0GV22 79 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms