RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 PIFOQ8TCI5 191 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 TMEM101Q96IK0 257 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 CHCHD5Q9BSY4 110 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM234AQ9H0X4 552 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 NOTCH2Q04721 2471 aa7.37□□□□□ -1.23
SMARCAL1-202ENST00000358207 NPIPB11E5RHQ5 1161 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 F5H768 121 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 CECR9P0C854 216 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 GRNP28799 593 aaKnown RBP7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 Q6P435 159 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 H2BFWTQ7Z2G1 175 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 MOB3BQ86TA1 216 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 TMEM158Q8WZ71 300 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 ENY2Q9NPA8 101 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 SPANXA1Q9NS26 97 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 AMMECR1Q9Y4X0 333 aaPredicted RBP7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 KLF12Q9Y4X4 402 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 LOC389332A0A1B0GUA5 103 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 C9JAW5 83 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 ZC2HC1BQ5TFG8 222 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 MORN5Q5VZ52 161 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 NABP2Q9BQ15 211 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 PRSS22Q9GZN4 317 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 RPP21Q9H633 154 aaKnown RBP7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 HIGD1AQ9Y241 93 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 TRBV6-6A0A0A6YYG2 114 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 A0A0G2JNJ9 132 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 OOSP1A8MZH6 123 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 TBC1D28Q2M2D7 210 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 GTSCR1Q86UQ5 136 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 WDR31Q8NA23 367 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 OR9G1Q8NH87 305 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 IFI27L1Q96BM0 104 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 Q9UFV3 132 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 TLN2Q9Y4G6 2542 aa7.36□□□□□ -1.23
SMARCAL1-202ENST00000358207 DOPEY2Q9Y3R5 2298 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 CCDC168Q8NDH2 2452 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 EIF4EBP1Q13541 118 aaPredicted RBP7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 SBSPONQ8IVN8 264 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 RFESDQ8TAC1 157 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 RND1Q92730 232 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 KLK5Q9Y337 293 aaPredicted RBP7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 FCER1GP30273 86 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 GNG5P63218 68 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 PAX8Q06710 450 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 RBPMS2Q6ZRY4 209 aaKnown RBP7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 ODF3Q96PU9 254 aa7.35□□□□□ -1.23
SMARCAL1-202ENST00000358207 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 SRRM4A7MD48 611 aaKnown RBP7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 CDSNQ15517 529 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 MSMPQ1L6U9 139 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 OR1L4Q8NGR5 311 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 BAALCQ8WXS3 180 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 EDA2RQ9HAV5 297 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 ARHGAP32A7KAX9 2087 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 PEX7O00628 323 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 WNT9BO14905 357 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 ATP5IP56385 69 aaPredicted RBP7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 FAM201AQ5SY85 155 aa7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 KLF14Q8TD94 323 aaPredicted RBP7.34□□□□□ -1.23
SMARCAL1-202ENST00000358207 IGHV1-18A0A0C4DH31 117 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 TMEM213A2RRL7 107 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 NPFFO15130 113 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 HIST2H2BCQ6DN03 193 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 OR10J6PQ8NGY7 276 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ITLN1Q8WWA0 313 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 COQ2Q96H96 371 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 HIST1H4GQ99525 98 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ZMAT4Q9H898 229 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 MAST4O15021 2626 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 TRAV8-2A0A0B4J237 113 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 LOC107984156A0A0G2JMH3 177 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 A0A1W2PPI3 338 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 HAX1O00165 279 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 TIMM8AO60220 97 aaPredicted RBP7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 KIR2DS2P43631 304 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ZNF672Q499Z4 452 aaPredicted RBP7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ZNF329Q86UD4 541 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ARL17AQ8IVW1 177 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ABCA1O95477 2261 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 IGKV1OR2-108A0A075B7D4 117 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 C19orf71A6NCJ1 209 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 LINC00473A8K010 186 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 HOXA3O43365 443 aaPredicted RBP7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 TCL1BO95988 128 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 ASIPP42127 132 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 TAL2Q16559 108 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 KLF17Q5JT82 389 aaPredicted RBP7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 Q71RC1 249 aaPredicted RBP7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 LRRC75A-AS1Q8N1F1 130 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 FAM167A-AS1Q96KT0 104 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 DUX5Q96PT3 197 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 MLST8Q9BVC4 326 aa7.33□□□□□ -1.24
SMARCAL1-202ENST00000358207 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.32□□□□□ -1.245e-6■■■■□ 26.6
SMARCAL1-202ENST00000358207 MBD3L4A6NDZ8 208 aaPredicted RBP7.32□□□□□ -1.24
SMARCAL1-202ENST00000358207 MBD3L3A6NE82 208 aaPredicted RBP7.32□□□□□ -1.24
SMARCAL1-202ENST00000358207 MBD3L5A6NJ08 208 aaPredicted RBP7.32□□□□□ -1.24
SMARCAL1-202ENST00000358207 A8MWV9 139 aa7.32□□□□□ -1.24
SMARCAL1-202ENST00000358207 C15orf65H3BRN8 121 aa7.32□□□□□ -1.24
SMARCAL1-202ENST00000358207 H3BVH4 76 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms