RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 HERV-K104P63124 156 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 MRPL20Q9BYC9 149 aaKnown RBP3.3□□□□□ -1.88
SYNE2-204ENST00000358025 H3BRN7 92 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CECR9P0C854 216 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DPH3P1Q9H4G8 78 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 C5orf64Q2M2E5 130 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 C8orf86Q6ZUL3 223 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 LHFPL4Q7Z7J7 247 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SELENOKQ9Y6D0 94 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM178BH3BS89 294 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TIMM17BO60830 172 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 ODF3Q96PU9 254 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TEX48A0A1B0GUV7 120 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CARD19Q96LW7 228 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 RCHY1Q96PM5 261 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 H0YGX0 51 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CD3EP07766 207 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF524Q96C55 264 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 RFPL3SP0C7P2 107 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CD177Q8N6Q3 437 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DEFB124Q8NES8 71 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 PTPRBP23467 1997 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SRRM4A7MD48 611 aaKnown RBP3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SH2D1AO60880 128 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 NDUFA3O95167 84 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DTX2Q86UW9 622 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TMEM86BQ8N661 226 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 ZNRF1Q8ND25 227 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 TSSC4Q9Y5U2 329 aaPredicted RBP3.3□□□□□ -1.88
SYNE2-204ENST00000358025 GPR179Q6PRD1 2367 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 ADAMTS20P59510 1910 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CDPF1Q6NVV7 123 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 C16orf92Q96LL3 132 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 CTSBP07858 339 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 VPREB1P12018 145 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 DDB2Q92466 427 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SMIM2Q9BVW6 85 aa3.3□□□□□ -1.88
SYNE2-204ENST00000358025 SLC25A20O43772 301 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 IGLV2-14P01704 120 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 TRGV11A0A075B6L2 103 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 FOXE3Q13461 319 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 LINC00643Q86TS7 51 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 SPG11Q96JI7 2443 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 PRTN3P24158 256 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ODF1Q14990 250 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 C2orf82Q6UX34 121 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 CD59P13987 128 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 LINC01546A6NGU7 62 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 MRPL51Q4U2R6 128 aaKnown RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV4-4A0A075B6R2 117 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 NBR2O15453 112 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 NDUFC1O43677 76 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 SLC25A29Q8N8R3 303 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 C5orf63A6NC05 138 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 C9JAW5 83 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 LY6G5BQ8NDX9 201 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 SIGLEC15Q6ZMC9 328 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF826PQ6ZT77 177 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 FOXI1Q12951 378 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 WFDC2Q14508 124 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 FGFBP3Q8TAT2 258 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 LINC00479Q96M42 142 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 A0A0B4J2C4 111 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 PGPEP1Q9NXJ5 209 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 H3BUA1 57 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ZC2HC1BQ5TFG8 222 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ZNF415Q09FC8 603 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ST6GALNAC6Q969X2 333 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV3OR16-12A0A075B7B8 117 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 CRIP3Q6Q6R5 217 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 IGKV1D-17A0A075B6S4 117 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 H3BMM0 161 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 COLQQ9Y215 455 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 ZMAT4Q9H898 229 aa3.29□□□□□ -1.88
SYNE2-204ENST00000358025 MBD3L4A6NDZ8 208 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 MBD3L3A6NE82 208 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 MBD3L5A6NJ08 208 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 MBD3L2Q8NHZ7 208 aaPredicted RBP3.29□□□□□ -1.88
SYNE2-204ENST00000358025 EMP1P54849 157 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 LEPROTO15243 131 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 COX7A1P24310 79 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 NPBQ8NG41 125 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 TIMM17AQ99595 171 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 TFF2Q03403 129 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 IGLL5B9A064 214 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RNF152Q8N8N0 203 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV1-69P01742 117 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 TRIP6Q15654 476 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 MRPS36P82909 103 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV1-3A0A0C4DH29 117 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 WISP2O76076 250 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 ARMS2P0C7Q2 107 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 IGHV3OR16-10A0A075B7F0 116 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RBMY1BA6NDE4 496 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RBMY1EA6NEQ0 496 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 J3QQQ9 107 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RBMY1DP0C7P1 496 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RBMY1A1P0DJD3 496 aaKnown RBP3.28□□□□□ -1.88
SYNE2-204ENST00000358025 RBMY1CP0DJD4 496 aa3.28□□□□□ -1.88
SYNE2-204ENST00000358025 NDUFV3P56181 108 aaKnown RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms