RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 FAM24BQ8N5W8 94 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 Q8TAT8 98 aa12.81□□□□□ -0.36
TPM1-205ENST00000357980 COLCA2A8K830 154 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 ID1P41134 155 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 LINC00322Q6ZN03 302 aaPredicted RBP12.8□□□□□ -0.36
TPM1-205ENST00000357980 COX8CQ7Z4L0 72 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 WFDC3Q8IUB2 231 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 TMEM61Q8N0U2 210 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 DYNLRB2Q8TF09 96 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 ZC2HC1AQ96GY0 325 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 PRR25Q96S07 402 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 CITED1Q99966 193 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 V9GYV3 84 aa12.8□□□□□ -0.36
TPM1-205ENST00000357980 TFPI2P48307 235 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 IBA57Q5T440 356 aaKnown RBP12.79□□□□□ -0.36
TPM1-205ENST00000357980 PRR27Q6MZM9 219 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 C15orf54Q8N8G6 183 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 GPR61Q9BZJ8 451 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 BIN3Q9NQY0 253 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 ZNF492Q9P255 531 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 URGCP-MRPS24S4R325 110 aa12.79□□□□□ -0.36
TPM1-205ENST00000357980 C19orf71A6NCJ1 209 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 ELOBQ15370 118 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 SAPCD1Q5SSQ6 148 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 PPP1R14DQ9NXH3 145 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 TRAV2A0A0B4J234 112 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 PFN1P07737 140 aaKnown RBP12.78□□□□□ -0.36
TPM1-205ENST00000357980 DEFB1P60022 68 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 PAFAH1B2P68402 229 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 KRTAP24-1Q3LI83 254 aa12.78□□□□□ -0.36
TPM1-205ENST00000357980 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.37
TPM1-205ENST00000357980 ZNF688P0C7X2 276 aa12.77□□□□□ -0.37
TPM1-205ENST00000357980 ZNF705DP0CH99 300 aaPredicted RBP12.77□□□□□ -0.37
TPM1-205ENST00000357980 ZNF705BP0CI00 300 aaPredicted RBP12.77□□□□□ -0.37
TPM1-205ENST00000357980 SNRPD3P62318 126 aaKnown RBP12.77□□□□□ -0.37
TPM1-205ENST00000357980 CD300EQ496F6 205 aaPredicted RBP12.77□□□□□ -0.37
TPM1-205ENST00000357980 NUDT10Q8NFP7 164 aa12.77□□□□□ -0.37
TPM1-205ENST00000357980 NUDT11Q96G61 164 aa12.77□□□□□ -0.37
TPM1-205ENST00000357980 ZNF138P52744 262 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 TMEM78Q5T7P6 136 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 RBPMS2Q6ZRY4 209 aaKnown RBP12.76□□□□□ -0.37
TPM1-205ENST00000357980 PRIMA1Q86XR5 153 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 OR8A1Q8NGG7 326 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 IMMP2LQ96T52 175 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 VWFP04275 2813 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 F6UB75 175 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 CRIP1P50238 77 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 PSMG4Q5JS54 123 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
TPM1-205ENST00000357980 FBN1P35555 2871 aaKnown RBP12.76□□□□□ -0.37
TPM1-205ENST00000357980 SORL1Q92673 2214 aa12.75□□□□□ -0.37
TPM1-205ENST00000357980 TRAV25A0A0B4J276 109 aa12.75□□□□□ -0.37
TPM1-205ENST00000357980 LINC00482Q8N8I6 264 aa12.75□□□□□ -0.37
TPM1-205ENST00000357980 NDFIP1Q9BT67 221 aa12.75□□□□□ -0.37
TPM1-205ENST00000357980 ZNF705GA8MUZ8 300 aaPredicted RBP12.74□□□□□ -0.37
TPM1-205ENST00000357980 PF4P02776 101 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 CXCL1P09341 107 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 SPAG8Q99932 426 aaPredicted RBP12.74□□□□□ -0.37
TPM1-205ENST00000357980 IL36BQ9NZH7 164 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 LENEPQ9Y5L5 61 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 TRBV24-1A0A075B6N3 115 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 TGIF2-C20orf24A0A0A6YYL0 155 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 IZUMO1RA6ND01 250 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 GATCO43716 136 aaKnown RBP12.74□□□□□ -0.37
TPM1-205ENST00000357980 CT45A10P0DMU9 189 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 S100PP25815 95 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 HIST1H1AQ02539 215 aaPredicted RBP12.74□□□□□ -0.37
TPM1-205ENST00000357980 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
TPM1-205ENST00000357980 ZNF256Q9Y2P7 627 aaPredicted RBP12.74□□□□□ -0.37
TPM1-205ENST00000357980 CA1P00915 261 aaPredicted RBP12.73□□□□□ -0.37
TPM1-205ENST00000357980 P01737 135 aa12.73□□□□□ -0.37
TPM1-205ENST00000357980 ZNF80P51504 273 aaPredicted RBP12.73□□□□□ -0.37
TPM1-205ENST00000357980 SMUG1Q53HV7 270 aa12.73□□□□□ -0.37
TPM1-205ENST00000357980 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
TPM1-205ENST00000357980 RPP21Q9H633 154 aaKnown RBP12.73□□□□□ -0.37
TPM1-205ENST00000357980 SAP30O75446 220 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 FAM3BP58499 235 aaPredicted RBP12.72□□□□□ -0.37
TPM1-205ENST00000357980 FAM162BQ5T6X4 162 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 KCNIP4Q6PIL6 250 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 DAZAP1Q96EP5 407 aaKnown RBP12.72□□□□□ -0.37
TPM1-205ENST00000357980 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 A0A0J9YX75 114 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 SMIM27A0A1W2PRY6 76 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 IGLV1-51P01701 117 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 CT83Q5H943 113 aa12.72□□□□□ -0.37
TPM1-205ENST00000357980 A0A1W2PPQ1 181 aa12.71□□□□□ -0.38
TPM1-205ENST00000357980 OR4C46A6NHA9 309 aa12.71□□□□□ -0.38
TPM1-205ENST00000357980 SH2D1AO60880 128 aa12.71□□□□□ -0.38
TPM1-205ENST00000357980 RAB5AP20339 215 aa12.71□□□□□ -0.38
TPM1-205ENST00000357980 OR4B1Q8NGF8 309 aa12.71□□□□□ -0.38
TPM1-205ENST00000357980 TRBV7-9A0A0J9YWB2 115 aa12.7□□□□□ -0.38
TPM1-205ENST00000357980 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
TPM1-205ENST00000357980 TSKUQ8WUA8 353 aa12.7□□□□□ -0.38
TPM1-205ENST00000357980 SAV1Q9H4B6 383 aaPredicted RBP12.7□□□□□ -0.38
TPM1-205ENST00000357980 AGRNO00468 2067 aa12.7□□□□□ -0.38
TPM1-205ENST00000357980 FOXI2Q6ZQN5 318 aa12.69□□□□□ -0.38
TPM1-205ENST00000357980 FAM210BQ96KR6 192 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms