RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 GCHFRP30047 84 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 SNRPEP62304 92 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 GNG5P63218 68 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 ACTL10Q5JWF8 245 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 MBD3L1Q8WWY6 194 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 GPR82Q96P67 336 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 MAP1LC3BQ9GZQ8 125 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 CLEC5AQ9NY25 188 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 TRAV8-1A0A0A6YYK1 113 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 FAM74A7A6NL05 159 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 TSTD3H0UI37 97 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 CIDEAO60543 219 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 HIST1H1EP10412 219 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 NUTF2P61970 127 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 HIST1H1AQ02539 215 aaPredicted RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 ERCC8Q13216 396 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 ICAM4Q14773 271 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 FAM74A3Q4VXF1 159 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 CFAP161Q6P656 301 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 ZFP82Q8N141 532 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 OR10J6PQ8NGY7 276 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 TMEM14CQ9P0S9 112 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 GNG13Q9P2W3 67 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 CTXND1A0A1B0GTU2 59 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 A6NJY4 79 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 F6UZH7 168 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 ATP5G3P48201 142 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 SUMO1P63165 101 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 BLOC1S1P78537 153 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 SVBPQ8N300 66 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 LYPD6BQ8NI32 183 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 SPAG8Q99932 426 aaPredicted RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 VGLL1Q99990 258 aa2.97□□□□□ -1.93
LIG4-201ENST00000356922 MRPL32Q9BYC8 188 aaKnown RBP2.97□□□□□ -1.93
LIG4-201ENST00000356922 A0A087X0K7 114 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 PGPA6NDG6 321 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 CXorf1O96002 111 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 HBE1P02100 147 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 IGHV4-30-4P0DP06 118 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 S100A2P29034 98 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 PSMB3P49720 205 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 CMC4P56277 68 aaPredicted RBP2.96□□□□□ -1.94
LIG4-201ENST00000356922 FXYD7P58549 80 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 PSG9Q00887 426 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 PQLC2Q6ZP29 291 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 TVP23CQ96ET8 276 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 TMEM167BQ9NRX6 74 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 MED9Q9NWA0 146 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 IGKV2-40A0A087WW87 121 aaPredicted RBP2.96□□□□□ -1.94
LIG4-201ENST00000356922 HSBP1L1C9JCN9 74 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 PAGE4O60829 102 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 IGKV2D-40P01614 121 aaPredicted RBP2.96□□□□□ -1.94
LIG4-201ENST00000356922 RAB5CP51148 216 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 UBE2G1P62253 170 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 HAGHQ16775 308 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 TMEM88Q6PEY1 159 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 Q9H3A6 140 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 TRAV34A0A0B4J273 112 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 IGLV2-11P01706 119 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 SAMD13Q5VXD3 122 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 ATRAIDQ6UW56 229 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 LINC00322Q6ZN03 302 aaPredicted RBP2.96□□□□□ -1.94
LIG4-201ENST00000356922 NDFIP1Q9BT67 221 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 DERL1Q9BUN8 251 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 SLC35B3Q9H1N7 401 aa2.96□□□□□ -1.94
LIG4-201ENST00000356922 CHTOPQ9Y3Y2 248 aaKnown RBP2.96□□□□□ -1.94
LIG4-201ENST00000356922 KMT2CQ8NEZ4 4911 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 TRAV25A0A0B4J276 109 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 H3BMM0 161 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 ISLRO14498 428 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 RBMY1A1P0DJD3 496 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 RBMY1CP0DJD4 496 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 RBMY1FQ15415 496 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 PSG3Q16557 428 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 ZNF674Q2M3X9 581 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 TMEM78Q5T7P6 136 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 AMTNQ6UX39 209 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 Q8TAT8 98 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 RPUSD4Q96CM3 377 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 NEU1Q99519 415 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 AGPAT4-IT1Q9H0P7 198 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 CT45A10P0DMU9 189 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 PPT1P50897 306 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 CNN1P51911 297 aaKnown RBP2.95□□□□□ -1.94
LIG4-201ENST00000356922 FABP9Q0Z7S8 132 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 GUK1Q16774 197 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 PRR9Q5T870 116 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 ZNF575Q86XF7 245 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 SBSPONQ8IVN8 264 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 C14orf144Q96I85 54 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 SLC50A1Q9BRV3 221 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 SRD5A3Q9H8P0 318 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 TREM1Q9NP99 234 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 GOLT1BQ9Y3E0 138 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 TRBV20OR9-2A0A075B6H5 130 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 TRAV12-2A0A075B6T6 113 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 TRAV1-1A0A0B4J248 108 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 A0A0J9YX75 114 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 M0R2Z0 102 aa2.95□□□□□ -1.94
LIG4-201ENST00000356922 FRMD6-AS1P0C7T7 363 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms