RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 NBEAP1P0C6P0 100 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 MIFP14174 115 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 LEPP41159 167 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 ARL6IP6Q8N6S5 226 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 OR4B1Q8NGF8 309 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 IL17DQ8TAD2 202 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 SUN5Q8TC36 379 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 HYLS1Q96M11 299 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 IGF2BP2-AS1Q96M15 143 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 NEU1Q99519 415 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF471Q9BX82 626 aaPredicted RBP2.89□□□□□ -1.95
CNOT4-202ENST00000356162 OTORQ9NRC9 128 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM167BQ9NRX6 74 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 GOLT1BQ9Y3E0 138 aa2.89□□□□□ -1.95
CNOT4-202ENST00000356162 AGRNO00468 2067 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 RBAKDNA6NC62 111 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 CXorf1O96002 111 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 IGKV3-20P01619 116 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SLC25A5P05141 298 aaKnown RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 OR10J4P0C629 311 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SEC11BP0C7V7 166 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ARL14EPLP0DKL9 152 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 TPT1P13693 172 aaKnown RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 GCHFRP30047 84 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 TSPOP30536 169 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 CSN1S1P47710 185 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 DPPA3Q6W0C5 159 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 RPP25LQ8N5L8 163 aaKnown RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 Q8NAQ8 132 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 CSNK1G2-AS1Q8NCQ2 148 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 OR11H2Q8NH07 326 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 RARRES2Q99969 163 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 C20orf144Q9BQM9 153 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SLC35B3Q9H1N7 401 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 Q9H3A6 140 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 XCL2Q9UBD3 114 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 TRBV7-9A0A0J9YWB2 115 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SERTM2A0A1B0GWG4 89 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SMIM9A6NGZ8 99 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF705FA8MVS1 300 aaPredicted RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 UMAD1C9J7I0 102 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 PRAC2D3DTV9 90 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 C3orf84H3BNL1 204 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 SNRPCP09234 159 aaKnown RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF705DP0CH99 300 aaPredicted RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF705BP0CI00 300 aaPredicted RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 FXYD7P58549 80 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ICAM4Q14773 271 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF726P1Q15940 193 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZFP69Q49AA0 526 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 FAM74A1Q5RGS3 127 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ZNF705AQ6ZN79 300 aaPredicted RBP2.88□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM256Q8N2U0 113 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 EXOC3-AS1Q8N2X6 119 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 MUC7Q8TAX7 377 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 RXFP4Q8TDU9 374 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 PPP1R14DQ9NXH3 145 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 ARL2-SNX15V9GYD0 113 aa2.88□□□□□ -1.95
CNOT4-202ENST00000356162 IGHV4-28A0A0C4DH34 117 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 A0A0J9YWU9 116 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 TEX48A0A1B0GUV7 120 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM189A5PLL7 270 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 MAP1LC3B2A6NCE7 125 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 M0R3E3 92 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 CDKN1BP46527 198 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 SPINK13Q1W4C9 94 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 EIF5AL1Q6IS14 154 aaKnown RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 C9orf47Q6ZRZ4 202 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 SSX7Q7RTT5 188 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 SLC51BQ86UW2 128 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 BAP18Q8IXM2 172 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 C9orf62Q8N4C0 152 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 FAM19A4Q96LR4 140 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 LINC00477Q96M19 166 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 MAP1LC3BQ9GZQ8 125 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 ALMS1Q8TCU4 4167 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 IGKV2-40A0A087WW87 121 aaPredicted RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 A0A1B0GVG6 124 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 A0A1W2PRE2 83 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 DIRC3C9JPN6 131 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 M0R2Z0 102 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 HMGB3O15347 200 aaKnown RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 CRXO43186 299 aaPredicted RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 EIF3GO75821 320 aaKnown RBP eCLIP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 IGKV2D-40P01614 121 aaPredicted RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 HBE1P02100 147 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 NMBP08949 121 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 CRISP2P16562 243 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 RAB5CP51148 216 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 RANP62826 216 aaKnown RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 LGALSLQ3ZCW2 172 aaPredicted RBP2.87□□□□□ -1.95
CNOT4-202ENST00000356162 TMEM78Q5T7P6 136 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 C1orf158Q8N1D5 194 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 C5orf17Q8NAS9 161 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 CMTM2Q8TAZ6 248 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 TMED6Q8WW62 240 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 C8orf49Q96NF6 230 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 LENEPQ9Y5L5 61 aa2.87□□□□□ -1.95
CNOT4-202ENST00000356162 DYNC2H1Q8NCM8 4307 aaKnown RBP2.86□□□□□ -1.95
CNOT4-202ENST00000356162 C7orf71A4D174 169 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms