RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 ANXA2RQ3ZCQ2 193 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 NBL1P41271 181 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 FAM120AOSQ5T036 256 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 TMEM243Q9BU79 118 aa14.39□□□□□ -0.11
COL18A1-202ENST00000355480 YLPM1P49750 1951 aaKnown RBP14.39□□□□□ -0.11
COL18A1-202ENST00000355480 WISP1O95388 367 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 ZNF114Q8NC26 417 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 SNHG12Q9BXW3 62 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 TCF20Q9UGU0 1960 aaKnown RBP14.38□□□□□ -0.11
COL18A1-202ENST00000355480 PRSS33Q8NF86 280 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 TMEM141Q96I45 108 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 SPTAN1Q13813 2472 aaKnown RBP14.38□□□□□ -0.11
COL18A1-202ENST00000355480 TMEM126AQ9H061 195 aa14.38□□□□□ -0.11
COL18A1-202ENST00000355480 KIR3DS1Q14943 382 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.37□□□□□ -0.11
COL18A1-202ENST00000355480 STPG4Q8N801 248 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 THAP8Q8NA92 274 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 FAM104BQ5XKR9 115 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 SDHAF1A6NFY7 115 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 H3BRN7 92 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 EREGO14944 169 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 GAGE2AQ6NT46 116 aa14.37□□□□□ -0.11
COL18A1-202ENST00000355480 VWA8A3KMH1 1905 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 ELANEP08246 267 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 CGB7P0DN87 165 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 WT1-ASQ06250 92 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 VWC2Q2TAL6 325 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 DIAPH2-AS1Q14236 149 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 A0A096LPF7 62 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 MMP23AO75900 390 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 NEGR1Q7Z3B1 354 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 HAPLN4Q86UW8 402 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 Q8N8P6 123 aa14.36□□□□□ -0.11
COL18A1-202ENST00000355480 TRAV26-2A0A0B4J265 109 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 FAM231BA6NCW3 169 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 LURAP1LQ8IV03 231 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 PRR25Q96S07 402 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 ZMAT4Q9H898 229 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 IGHV7-4-1A0A0J9YVY3 117 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 RMI2Q96E14 147 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 CYYR1Q96J86 154 aa14.35□□□□□ -0.11
COL18A1-202ENST00000355480 C15orf65H3BRN8 121 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 PIP4P1Q86T03 277 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 CFPP27918 469 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 ZFAND6Q6FIF0 208 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 WNK2Q9Y3S1 2297 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 NXPH4O95158 308 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 IGF2BP2-AS1Q96M15 143 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 CT83Q5H943 113 aa14.34□□□□□ -0.11
COL18A1-202ENST00000355480 FNDC1Q4ZHG4 1894 aaPredicted RBP14.34□□□□□ -0.11
COL18A1-202ENST00000355480 HLA-DRB4P13762 266 aa14.33□□□□□ -0.11
COL18A1-202ENST00000355480 ZNF134P52741 427 aa14.33□□□□□ -0.11
COL18A1-202ENST00000355480 MRAPQ8TCY5 172 aa14.33□□□□□ -0.11
COL18A1-202ENST00000355480 HLA-DRB4X5D2U9 266 aa14.33□□□□□ -0.11
COL18A1-202ENST00000355480 DOCK8Q8NF50 2099 aa14.33□□□□□ -0.12
COL18A1-202ENST00000355480 C9JAW5 83 aa14.33□□□□□ -0.12
COL18A1-202ENST00000355480 IGKV1-39P01597 117 aa14.33□□□□□ -0.12
COL18A1-202ENST00000355480 IGKV1D-39P04432 117 aa14.33□□□□□ -0.12
COL18A1-202ENST00000355480 DEFB112Q30KQ8 113 aa14.33□□□□□ -0.12
COL18A1-202ENST00000355480 NDUFS7O75251 213 aa14.32□□□□□ -0.12
COL18A1-202ENST00000355480 TMEM14CQ9P0S9 112 aa14.32□□□□□ -0.12
COL18A1-202ENST00000355480 C1orf147Q96MC9 270 aaPredicted RBP14.32□□□□□ -0.12
COL18A1-202ENST00000355480 MRPL51Q4U2R6 128 aaKnown RBP14.31□□□□□ -0.12
COL18A1-202ENST00000355480 TICRRQ7Z2Z1 1910 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 IGHV4-59P01825 116 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 KLF5Q13887 457 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-202ENST00000355480 VPREB3Q9UKI3 123 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 IGHV2-5P01817 119 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 ANGP03950 147 aaKnown RBP14.31□□□□□ -0.12
COL18A1-202ENST00000355480 GRNP28799 593 aaKnown RBP14.31□□□□□ -0.12
COL18A1-202ENST00000355480 PRSS57Q6UWY2 283 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 C18orf32Q8TCD1 76 aa14.31□□□□□ -0.12
COL18A1-202ENST00000355480 TSSC4Q9Y5U2 329 aaPredicted RBP14.31□□□□□ -0.12
COL18A1-202ENST00000355480 HOXB4P17483 251 aaPredicted RBP14.3□□□□□ -0.12
COL18A1-202ENST00000355480 ZNF524Q96C55 264 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 KAAG1Q9UBP8 84 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 ZNF407Q9C0G0 2248 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 C22orf46C9J442 243 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 Q0VG73 95 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 CACNA1HO95180 2353 aa14.3□□□□□ -0.12
COL18A1-202ENST00000355480 PLXNA3P51805 1871 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 ADCYAP1P18509 176 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 SHISA9B4DS77 424 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 IGLC1P0CG04 106 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 PRSS29PA6NIE9 313 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 SUMO4Q6EEV6 95 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 PYY3Q5JQD4 70 aa14.29□□□□□ -0.12
COL18A1-202ENST00000355480 NOTCH3Q9UM47 2321 aa14.28□□□□□ -0.12
COL18A1-202ENST00000355480 CLPSL2Q6UWE3 100 aa14.28□□□□□ -0.12
COL18A1-202ENST00000355480 EDA2RQ9HAV5 297 aa14.28□□□□□ -0.12
COL18A1-202ENST00000355480 H3BUA1 57 aa14.28□□□□□ -0.12
COL18A1-202ENST00000355480 ATP6V0BQ99437 205 aa14.27□□□□□ -0.12
COL18A1-202ENST00000355480 SIP14410 1827 aa14.27□□□□□ -0.12
COL18A1-202ENST00000355480 RSPO1Q2MKA7 263 aaPredicted RBP14.27□□□□□ -0.12
COL18A1-202ENST00000355480 HOXD3P31249 432 aaPredicted RBP14.27□□□□□ -0.13
COL18A1-202ENST00000355480 RBMY1FQ15415 496 aaKnown RBP14.27□□□□□ -0.13
COL18A1-202ENST00000355480 A0A0J9YY99 117 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 CCL24O00175 119 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 SOCS3O14543 225 aa14.26□□□□□ -0.13
COL18A1-202ENST00000355480 K7EM74 188 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms