RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 hADV38S2A0JD32 116 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 NKX6-3A6NJ46 265 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 KITLGP21583 273 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 LMO4P61968 165 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 TMEM18Q96B42 140 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 PSMG3Q9BT73 122 aaPredicted RBP4.18□□□□□ -1.74
CD47-201ENST00000355354 ZNF747Q9BV97 191 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 SLC25A39Q9BZJ4 359 aaPredicted RBP4.18□□□□□ -1.74
CD47-201ENST00000355354 LAMTOR2Q9Y2Q5 125 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 STRAPQ9Y3F4 350 aaKnown RBP4.18□□□□□ -1.74
CD47-201ENST00000355354 MPDU1O75352 247 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 PCBD1P61457 104 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 OR4S2Q8NH73 311 aa4.18□□□□□ -1.74
CD47-201ENST00000355354 CENPVL3A0A0U1RRI6 287 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 FAM90A18PA6NE21 464 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 FAM90A9PA6NNJ1 464 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 SCGB2A1O75556 95 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 VAMP2P63027 116 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 SERF2P84101 59 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 ARL6IP6Q8N6S5 226 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 SIGLEC8Q9NYZ4 499 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 NAT8Q9UHE5 227 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 OR51B2Q9Y5P1 312 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 TEX48A0A1B0GUV7 120 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 HELTA6NFD8 242 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 C17orf100A8MU93 164 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 GCGP01275 180 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 HSPE1P61604 102 aaKnown RBP4.17□□□□□ -1.74
CD47-201ENST00000355354 IBA57Q5T440 356 aaKnown RBP4.17□□□□□ -1.74
CD47-201ENST00000355354 IGLV2-18A0A075B6J9 118 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 D6R8Y8 96 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 TMEM178BH3BS89 294 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 UPK2O00526 184 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 S100A8P05109 93 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 PKIAP61925 76 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 TMEM249Q2WGJ8 235 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 BVES-AS1Q5T3Y7 98 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 OR8B3Q8NGG8 313 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 RAB40CQ96S21 281 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 NGBQ9NPG2 151 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 C22orf24Q9Y442 160 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 SMIM27A0A1W2PRY6 76 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 NBEAP1P0C6P0 100 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 PRRX1P54821 245 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 LINC00315P59091 139 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 SPATA45Q537H7 98 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 TMEM242Q9NWH2 141 aa4.17□□□□□ -1.74
CD47-201ENST00000355354 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
CD47-201ENST00000355354 HOXB1P14653 301 aaPredicted RBP4.16□□□□□ -1.74
CD47-201ENST00000355354 SRSF7Q16629 238 aaKnown RBP eCLIP4.16□□□□□ -1.74
CD47-201ENST00000355354 SAMD5Q5TGI4 173 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 STX12Q86Y82 276 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 CMTM2Q8TAZ6 248 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 ARL2-SNX15V9GYD0 113 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 FAM231BA6NCW3 169 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 IZUMO1RA6ND01 250 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 LY6LH3BQJ8 138 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 ARR3P36575 388 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 DAND5Q8N907 189 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 LCN2P80188 198 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 CFHR3Q02985 330 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 SLC35D1Q9NTN3 355 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 IL36BQ9NZH7 164 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 PROCRQ9UNN8 238 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 HERC1Q15751 4861 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 IGHV7-81A0A0B4J1V7 117 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 IGHV7-4-1A0A0J9YVY3 117 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 FAM181BA6NEQ2 426 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 IGHV1-8P0DP01 117 aa4.16□□□□□ -1.74
CD47-201ENST00000355354 CNN3Q15417 329 aaKnown RBP4.16□□□□□ -1.74
CD47-201ENST00000355354 ESDP10768 282 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 OPRK1P41145 380 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 UBE2L3P68036 154 aaKnown RBP4.15□□□□□ -1.74
CD47-201ENST00000355354 PRCDQ00LT1 54 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 PRNTQ86SH4 94 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 SRSF12Q8WXF0 261 aaKnown RBP4.15□□□□□ -1.74
CD47-201ENST00000355354 PKIBQ9C010 78 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 GOLT1BQ9Y3E0 138 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 OR5B21A6NL26 309 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 ANKRD30BLA7E2S9 258 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 H3BMG7 143 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 CACNG7P62955 275 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 LYZL1Q6UWQ5 148 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 BAGE2Q86Y30 109 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 GRAMD2BQ96HH9 432 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 CCL19Q99731 98 aa4.15□□□□□ -1.74
CD47-201ENST00000355354 IGHV4-61A0A0C4DH41 118 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 KIR2DS1A0A191URI9 304 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 NPIPB6E9PJ23 425 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 ENSAO43768 121 aaKnown RBP4.15□□□□□ -1.75
CD47-201ENST00000355354 OR2J3O76001 311 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 KIR2DS4P43632 304 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 KIR2DS1Q14954 304 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 TEPPQ6URK8 271 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 TMEM147Q9BVK8 224 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 HMCN2Q8NDA2 5059 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 BORCS7-ASMTA0A0B4J1R7 106 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 ZNF48Q96MX3 618 aaPredicted RBP4.15□□□□□ -1.75
CD47-201ENST00000355354 AGPAT4-IT1Q9H0P7 198 aa4.15□□□□□ -1.75
CD47-201ENST00000355354 MDFICQ9P1T7 246 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms