RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 PLNP26678 52 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 UBE2D1P51668 147 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TMEM30BQ3MIR4 351 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 SBSPONQ8IVN8 264 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 Q8N8P6 123 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 MYOZ3Q8TDC0 251 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 FBXL15Q9H469 300 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 ZFHX4Q86UP3 3567 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 A8MWV9 139 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TCL1BO95988 128 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 ANKRD29Q8N6D5 301 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TMEM190Q8WZ59 177 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 SHANK2-AS3Q9BTD1 123 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 IGHV1-18A0A0C4DH31 117 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 NTN3O00634 580 aaPredicted RBP6.14□□□□□ -1.43
CD46-203ENST00000354848 SPRY3O43610 288 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 GAGE2BQ13066 116 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 VMA21Q3ZAQ7 101 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 GAGE2EQ4V326 116 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 RAX2Q96IS3 184 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 GAGE2DQ9UEU5 116 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 TNFRSF18Q9Y5U5 241 aa6.14□□□□□ -1.43
CD46-203ENST00000354848 H3BRN7 92 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 H3BVH4 76 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 RASL11BQ9BPW5 248 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 TRAV4A0A0B4J268 109 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 K7ESF4 209 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
CD46-203ENST00000354848 CEACAM4O75871 244 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 IGLV1-44P01699 117 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 IGFBP4P22692 258 aa6.13□□□□□ -1.43
CD46-203ENST00000354848 ZNF80P51504 273 aaPredicted RBP6.13□□□□□ -1.43
CD46-203ENST00000354848 TRGV5A0A0B4J1U4 118 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 RPL27AP46776 148 aaKnown RBP6.12□□□□□ -1.43
CD46-203ENST00000354848 EFNA4P52798 201 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 TMEM78Q5T7P6 136 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 LYRM7Q5U5X0 104 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 C1orf122Q6ZSJ8 110 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CNEP1R1Q8N9A8 125 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 PRR25Q96S07 402 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CTSZQ9UBR2 303 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 PROCRQ9UNN8 238 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 IGKV2-40A0A087WW87 121 aaPredicted RBP6.12□□□□□ -1.43
CD46-203ENST00000354848 F8VRH5 84 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CRLF1O75462 422 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 SNCGO76070 127 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 IGKV1-17P01599 117 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 IGKV2D-40P01614 121 aaPredicted RBP6.12□□□□□ -1.43
CD46-203ENST00000354848 CLEC3BP05452 202 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CD7P09564 240 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CCL3L1P16619 93 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 LAGE3Q14657 143 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 PLGLAQ15195 96 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 COX8CQ7Z4L0 72 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 CNFNQ9BYD5 112 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 AAMDCQ9H7C9 122 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 HIF1ANQ9NWT6 349 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 RNF7Q9UBF6 113 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 DCHS1Q96JQ0 3298 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 H7C1H1 209 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 TGFAP01135 160 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 IFITM1P13164 125 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 TTC32Q5I0X7 151 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 C6orf15Q6UXA7 325 aaPredicted RBP6.12□□□□□ -1.43
CD46-203ENST00000354848 PIP4P1Q86T03 277 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 DTX2Q86UW9 622 aa6.12□□□□□ -1.43
CD46-203ENST00000354848 WT1P19544 449 aaPredicted RBP6.11□□□□□ -1.43
CD46-203ENST00000354848 PRTN3P24158 256 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 Q8TAT8 98 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 RAXQ9Y2V3 346 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 SMG1Q96Q15 3661 aaKnown RBP6.11□□□□□ -1.43
CD46-203ENST00000354848 IGHV3-72A0A0B4J1Y9 119 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 CENPVL3A0A0U1RRI6 287 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 SRSF9Q13242 221 aaKnown RBP eCLIP6.11□□□□□ -1.43
CD46-203ENST00000354848 PPP1R27Q86WC6 154 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 NDUFA11Q86Y39 141 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 ZGRF1Q86YA3 2104 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 OR11H6Q8NGC7 330 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 PLEKHB2Q96CS7 222 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 PSMG3-AS1Q96PY0 264 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 DKK4Q9UBT3 224 aa6.11□□□□□ -1.43
CD46-203ENST00000354848 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 TRAV12-1A0A0B4J245 112 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 ZNF815PA8K554 130 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 I3L2K1 104 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 ENSAO43768 121 aaKnown RBP6.1□□□□□ -1.43
CD46-203ENST00000354848 ORM1P02763 201 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 CD40P25942 277 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 ASIPP42127 132 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 SCGB1D4Q6XE38 83 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 C1orf162Q8NEQ5 155 aaPredicted RBP6.1□□□□□ -1.43
CD46-203ENST00000354848 WDFY4Q6ZS81 3184 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 CNTFRP26992 372 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 GATA4P43694 442 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 FAM159AQ6UWV7 190 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 ZNF491Q8N8L2 437 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 PRADC1Q9BSG0 188 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 MALRD1Q5VYJ5 2156 aa6.1□□□□□ -1.43
CD46-203ENST00000354848 PLCE1Q9P212 2302 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms