RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 KIR2DL5BA0A0G2JPC4 375 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 RPS20P60866 119 aaKnown RBP9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 GAGE1Q13065 139 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 KIR2DL5AQ8N109 375 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 DAZ1Q9NQZ3 744 aaKnown RBP9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 OSTCQ9NRP0 149 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 AP5S1Q9NUS5 200 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 AKAP13Q12802 2813 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 TRAV9-2A0A087WT02 112 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 USMG5Q96IX5 58 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 JMJD8Q96S16 334 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 COL5A1P20908 1838 aaPredicted RBP9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 EXPH5Q8NEV8 1989 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 J3QR89 54 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 NCR2O95944 276 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 EVI2AP22794 236 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 NMUP48645 174 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 PLP1P60201 277 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 STHQ8IWL8 128 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 MYOZ3Q8TDC0 251 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 UBE2E2Q96LR5 201 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 PRELID3AQ96N28 172 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 PAX1P15863 534 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 Q8N9W7 124 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 MEGF9Q9H1U4 602 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 ZNF256Q9Y2P7 627 aaPredicted RBP9.74□□□□□ -0.85
PCDHB11-201ENST00000354757 LINC01548A6NM66 108 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 TYMSP04818 313 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 MAJINQ3KP22 176 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 BOD1L1Q8NFC6 3051 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 IZUMO1RA6ND01 250 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 APOHP02749 345 aaPredicted RBP9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 IGLC2P0DOY2 106 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 IGLC3P0DOY3 106 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PRR20EP86478 221 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PRR20CP86479 221 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PRR20DP86480 221 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PRR20BP86481 221 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PRR20AP86496 221 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 ZNF491Q8N8L2 437 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 WFDC11Q8NEX6 87 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 OR11H1Q8NG94 326 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 ZNF502Q8TBZ5 544 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 PYGO2Q9BRQ0 406 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 SLC25A2Q9BXI2 301 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 RPL35AP18077 110 aaKnown RBP9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
PCDHB11-201ENST00000354757 CCL25O15444 150 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 IGKV1-17P01599 117 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 DEFB131AP59861 70 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 ORAOV1Q8WV07 137 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 GNB1LQ9BYB4 327 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 IGHV3-73A0A0B4J1V6 119 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 A6NDN8 102 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 HIST2H2BDQ6DRA6 164 aa9.72□□□□□ -0.85
PCDHB11-201ENST00000354757 hDV102S1A0JD36 115 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 FAM223BA6NKX1 122 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 FAM223AQ8IWN6 122 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 FNDC10F2Z333 226 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 F6UB75 175 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 K7EIM0 57 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 HSPB8Q9UJY1 196 aa9.71□□□□□ -0.85
PCDHB11-201ENST00000354757 IGLV2-23P01705 113 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 YPEL3P61236 119 aaPredicted RBP9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 TEX43Q6ZNM6 134 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 SIRPDQ9H106 197 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 ZNF138P52744 262 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 LYZL1Q6UWQ5 148 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 SCGB1D4Q6XE38 83 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 TSKUQ8WUA8 353 aa9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 BBC3Q96PG8 261 aaPredicted RBP9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 SRSF8Q9BRL6 282 aaKnown RBP9.71□□□□□ -0.86
PCDHB11-201ENST00000354757 KMT2EQ8IZD2 1858 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 TRBV19A0A075B6N1 114 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 C8orf31Q8N9H6 132 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 TMEM75Q8N9X5 138 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 C8orf49Q96NF6 230 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 LSM4Q9Y4Z0 139 aaKnown RBP9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 TRGV2A0A075B6R0 118 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 TRAV21A0A0B4J279 112 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 RCHY1Q96PM5 261 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 CFAP46Q8IYW2 2715 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 PSG3Q16557 428 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 C9orf139Q6ZV77 190 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
PCDHB11-201ENST00000354757 ADAMTS20P59510 1910 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 H3BUT2 72 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 SPRY2O43597 315 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 SH2D1AO60880 128 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 SPINK13Q1W4C9 94 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 TCTEX1D4Q5JR98 221 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 TRAV9-1A0A075B6T8 112 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 A0A087X0K7 114 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 FRMD6-AS1P0C7T7 363 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 NUP35Q8NFH5 326 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 GCSHP23434 173 aa9.69□□□□□ -0.86
PCDHB11-201ENST00000354757 OR10J3Q5JRS4 329 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms