RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ALMS1Q8TCU4 4167 aa15.79■□□□□ 0.12
SNX3-202ENST00000349379 TEX48A0A1B0GUV7 120 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 PLAC8L1A1L4L8 177 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 KLLNB2CW77 178 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 ARL14EPLP0DKL9 152 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 CRISP2P16562 243 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 EMP1P54849 157 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 FAM222AQ5U5X8 452 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 LINC01587Q99440 93 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 VGLL1Q99990 258 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 OTORQ9NRC9 128 aa15.78■□□□□ 0.12
SNX3-202ENST00000349379 TRAV10A0A0B4J240 114 aa15.77■□□□□ 0.12
SNX3-202ENST00000349379 RBAKDNA6NC62 111 aa15.77■□□□□ 0.12
SNX3-202ENST00000349379 H7BYZ3 331 aa15.77■□□□□ 0.12
SNX3-202ENST00000349379 SLC25A5P05141 298 aaKnown RBP15.77■□□□□ 0.12
SNX3-202ENST00000349379 AZU1P20160 251 aa15.77■□□□□ 0.12
SNX3-202ENST00000349379 ZNF492Q9P255 531 aa15.77■□□□□ 0.12
SNX3-202ENST00000349379 RYR2Q92736 4967 aa15.77■□□□□ 0.11
SNX3-202ENST00000349379 NMBP08949 121 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 CSN1S1P47710 185 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 ZNF767PQ75MW2 155 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 SSX7Q7RTT5 188 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 ARL6IP6Q8N6S5 226 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 C2CD4CQ8TF44 421 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 ST6GAL2Q96JF0 529 aa15.76■□□□□ 0.11
SNX3-202ENST00000349379 ACTR3CQ9C0K3 210 aaPredicted RBP15.76■□□□□ 0.11
SNX3-202ENST00000349379 DNAH1Q9P2D7 4330 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 TRBV7-9A0A0J9YWB2 115 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 DIRC3C9JPN6 131 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 GCHFRP30047 84 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 ZNF726P1Q15940 193 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 TMEM78Q5T7P6 136 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 ZFAND2AQ8N6M9 145 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 RXFP4Q8TDU9 374 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 ARPC5LQ9BPX5 153 aa15.75■□□□□ 0.11
SNX3-202ENST00000349379 PGPA6NDG6 321 aa15.74■□□□□ 0.11
SNX3-202ENST00000349379 RNASE8Q8TDE3 154 aaKnown RBP15.74■□□□□ 0.11
SNX3-202ENST00000349379 NIPSNAP3BQ9BS92 247 aa15.74■□□□□ 0.11
SNX3-202ENST00000349379 TRAV12-3A0A0B4J271 114 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 A0A0D9SG52 128 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 C7orf71A4D174 169 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 J3KRW8 73 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 ZNF138P52744 262 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 TCTAP57738 103 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 ZNF493Q6ZR52 646 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 TMEM263Q8WUH6 116 aaKnown RBP15.73■□□□□ 0.11
SNX3-202ENST00000349379 LINC00476Q8WZB0 136 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 C16orf74Q96GX8 76 aa15.73■□□□□ 0.11
SNX3-202ENST00000349379 CTXND1A0A1B0GTU2 59 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 LYRM9A8MSI8 78 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 ZNF324O75467 553 aaPredicted RBP15.72■□□□□ 0.11
SNX3-202ENST00000349379 CXorf1O96002 111 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 CD300CQ08708 224 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 FAM74A1Q5RGS3 127 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 TCTE3Q8IZS6 198 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 PYGO2Q9BRQ0 406 aa15.72■□□□□ 0.11
SNX3-202ENST00000349379 DEFB131BA0A096LNP1 70 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 BTN1A1Q13410 526 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 AKR1C8PQ5T2L2 129 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 PRR9Q5T870 116 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 Q8TAT8 98 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 TMED6Q8WW62 240 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 HYLS1Q96M11 299 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 TMEM167BQ9NRX6 74 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 PLA2G2EQ9NZK7 142 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 LENEPQ9Y5L5 61 aa15.71■□□□□ 0.11
SNX3-202ENST00000349379 BCL2L11O43521 198 aa15.7■□□□□ 0.1
SNX3-202ENST00000349379 CMTM2Q8TAZ6 248 aa15.7■□□□□ 0.1
SNX3-202ENST00000349379 LINC00467Q9BRT7 94 aa15.7■□□□□ 0.1
SNX3-202ENST00000349379 APLNQ9ULZ1 77 aa15.7■□□□□ 0.1
SNX3-202ENST00000349379 GPX1P07203 203 aa15.69■□□□□ 0.1
SNX3-202ENST00000349379 HTN1P15515 57 aa15.69■□□□□ 0.1
SNX3-202ENST00000349379 HYDINQ4G0P3 5121 aa15.69■□□□□ 0.1
SNX3-202ENST00000349379 KANTRA0A1W2PQU2 76 aa15.68■□□□□ 0.1
SNX3-202ENST00000349379 IGLL5B9A064 214 aa15.68■□□□□ 0.1
SNX3-202ENST00000349379 SEC11BP0C7V7 166 aa15.68■□□□□ 0.1
SNX3-202ENST00000349379 GGTLC3B5MD39 225 aa15.67■□□□□ 0.1
SNX3-202ENST00000349379 RNASE4P34096 147 aaKnown RBP15.67■□□□□ 0.1
SNX3-202ENST00000349379 DAD1P61803 113 aa15.67■□□□□ 0.1
SNX3-202ENST00000349379 GOLT1AQ6ZVE7 132 aa15.67■□□□□ 0.1
SNX3-202ENST00000349379 TMUB2Q71RG4 321 aa15.67■□□□□ 0.1
SNX3-202ENST00000349379 C5orf17Q8NAS9 161 aa15.67■□□□□ 0.1
SNX3-202ENST00000349379 ZNF471Q9BX82 626 aaPredicted RBP15.67■□□□□ 0.1
SNX3-202ENST00000349379 TIMM8BQ9Y5J9 83 aaPredicted RBP15.67■□□□□ 0.1
SNX3-202ENST00000349379 IGHV4-4A0A075B6R2 117 aa15.66■□□□□ 0.1
SNX3-202ENST00000349379 GNG5P63218 68 aa15.66■□□□□ 0.1
SNX3-202ENST00000349379 CCDC28AQ8IWP9 274 aa15.66■□□□□ 0.1
SNX3-202ENST00000349379 RPH3ALQ9UNE2 315 aa15.66■□□□□ 0.1
SNX3-202ENST00000349379 SERTM2A0A1B0GWG4 89 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 A0A1W2PRE2 83 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 ANXA2RQ3ZCQ2 193 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 LGALS9CQ6DKI2 356 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 Q6ZQT7 251 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 LINC00612Q8N6U2 182 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 TMPRSS5Q9H3S3 457 aa15.65■□□□□ 0.1
SNX3-202ENST00000349379 TRAV8-1A0A0A6YYK1 113 aa15.64■□□□□ 0.09
SNX3-202ENST00000349379 TCRAP04437 139 aa15.64■□□□□ 0.09
SNX3-202ENST00000349379 Q6AWC8 147 aa15.64■□□□□ 0.09
SNX3-202ENST00000349379 EIF4E3Q8N5X7 224 aaKnown RBP15.64■□□□□ 0.09
SNX3-202ENST00000349379 C11orf72Q8NBR9 251 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms