RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 IFI27P40305 119 aaPredicted RBP11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 TFPI2P48307 235 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 HINT1P49773 126 aaPredicted RBP11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 CRIP2P52943 208 aaPredicted RBP11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 TWIST1Q15672 202 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 LINC01559Q495D7 138 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 AMN1Q8IY45 258 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 C5orf56Q8N8D9 126 aa11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 PEF1Q9UBV8 284 aaKnown RBP11.96□□□□□ -0.49
TNFSF13-202ENST00000349228 TPRP12270 2363 aaKnown RBP11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 FAM223BA6NKX1 122 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 ZNF80P51504 273 aaPredicted RBP11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 ATP5G2Q06055 141 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 FAM223AQ8IWN6 122 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 CCDC140Q96MF4 163 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 CITED1Q99966 193 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 SCRT2Q9NQ03 307 aa11.96□□□□□ -0.5
TNFSF13-202ENST00000349228 SMG1Q96Q15 3661 aaKnown RBP11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 hDV102S1A0JD36 115 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 CLPSL1A2RUU4 121 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 ORM1P02763 201 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 CKS2P33552 79 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 CLEC19AQ6UXS0 136 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 Q8TAT8 98 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 PRORYQ9H606 182 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 MOB4Q9Y3A3 225 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 U3KQE9 123 aa11.95□□□□□ -0.5
TNFSF13-202ENST00000349228 PAX8Q06710 450 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 C12orf54Q6X4T0 127 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 KALRNO60229 2985 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 LGALS9BQ3B8N2 356 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 LGALS9CQ6DKI2 356 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 PIP4P2Q8N4L2 257 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 SPTA1P02549 2419 aa11.94□□□□□ -0.5
TNFSF13-202ENST00000349228 HBDP02042 147 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 NPSP0C0P6 89 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 PSMG4Q5JS54 123 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 IGFL4Q6B9Z1 124 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 IGHV3-35A0A0C4DH35 117 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 LINC01546A6NGU7 62 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 G3V318 75 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 BRI3O95415 125 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 PRB4P10163 310 aaPredicted RBP11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 LY6DQ14210 128 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 OR1N2Q8NGR9 330 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 VCX2Q9H322 139 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 COX11Q9Y6N1 276 aa11.93□□□□□ -0.5
TNFSF13-202ENST00000349228 A0A096LNJ9 63 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 TRAV41A0A0B4J266 112 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 LOC389332A0A1B0GUA5 103 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 TCF21O43680 179 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 C19orf54Q5BKX5 351 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 TMEM78Q5T7P6 136 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 ZNF575Q86XF7 245 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 PSMG3-AS1Q96PY0 264 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 MEGF9Q9H1U4 602 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 MAP1LC3AQ9H492 121 aa11.92□□□□□ -0.5
TNFSF13-202ENST00000349228 COX8AP10176 69 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 ERCC8Q13216 396 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 C9orf47Q6ZRZ4 202 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 LENEPQ9Y5L5 61 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 IGHV3OR16-8A0A075B7F1 116 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 IGHV1-69DA0A0B4J2H0 117 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 PRAC2D3DTV9 90 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 IGHV1-69P01742 117 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 AGPAT4-IT1Q9H0P7 198 aa11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 NXT2Q9NPJ8 142 aaKnown RBP11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 TIMM8BQ9Y5J9 83 aaPredicted RBP11.91□□□□□ -0.5
TNFSF13-202ENST00000349228 LINC01548A6NM66 108 aa11.9□□□□□ -0.5
TNFSF13-202ENST00000349228 H3BUA1 57 aa11.9□□□□□ -0.5
TNFSF13-202ENST00000349228 RNF185Q96GF1 192 aa11.9□□□□□ -0.5
TNFSF13-202ENST00000349228 TRAV8-2A0A0B4J237 113 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 NPYP01303 97 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 IGHV4-39P01824 125 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 FAM106AQ4KMX7 169 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 C8orf86Q6ZUL3 223 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 PIMREGQ9BSJ6 248 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 K7EP13 123 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 IL17RELQ6ZVW7 336 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 RNF182Q8N6D2 247 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 IFI27L1Q96BM0 104 aa11.89□□□□□ -0.51
TNFSF13-202ENST00000349228 NUDT3O95989 172 aa11.88□□□□□ -0.51
TNFSF13-202ENST00000349228 IGF1P05019 195 aa11.88□□□□□ -0.51
TNFSF13-202ENST00000349228 LOXL1Q08397 574 aaPredicted RBP11.88□□□□□ -0.51
TNFSF13-202ENST00000349228 MPV17L2Q567V2 206 aa11.88□□□□□ -0.51
TNFSF13-202ENST00000349228 ZZEF1O43149 2961 aa11.88□□□□□ -0.51
TNFSF13-202ENST00000349228 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
TNFSF13-202ENST00000349228 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
TNFSF13-202ENST00000349228 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
TNFSF13-202ENST00000349228 MUC21Q5SSG8 566 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms