RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 C1orf159Q96HA4 380 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 NDUFB8O95169 186 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 PIMREGQ9BSJ6 248 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 IGLV3-1P01715 115 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 C3orf56Q8N813 242 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 C5orf64Q2M2E5 130 aa9.69□□□□□ -0.86
COL12A1-202ENST00000345356 TMEM14CQ9P0S9 112 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 HEATR1Q9H583 2144 aaKnown RBP9.68□□□□□ -0.86
COL12A1-202ENST00000345356 TTTY13Q9BZ97 58 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 PRR19A6NJB7 356 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 COX6B1P14854 86 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 THSD7AQ9UPZ6 1657 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 RNF183Q96D59 192 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
COL12A1-202ENST00000345356 J3KT08 172 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 HERV-K104P63124 156 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 WT1-ASQ06250 92 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 FER1L5A0AVI2 2057 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 BUB1B-PAK6H3BSN5 160 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 SYNJ2BPP57105 145 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 TRPT1Q86TN4 253 aaKnown RBP9.67□□□□□ -0.86
COL12A1-202ENST00000345356 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 WDR86Q86TI4 376 aa9.67□□□□□ -0.86
COL12A1-202ENST00000345356 NEU4Q8WWR8 484 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-202ENST00000345356 TMEM178BH3BS89 294 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 ETV2O00321 342 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-202ENST00000345356 UBL5Q9BZL1 73 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 TRAV41A0A0B4J266 112 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 SDHAF1A6NFY7 115 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 LYPD6Q86Y78 171 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 RNASE6Q93091 150 aaKnown RBP9.66□□□□□ -0.86
COL12A1-202ENST00000345356 FAM236AA0A1B0GUQ0 79 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 FAM236BA0A1B0GV22 79 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 NTN3O00634 580 aaPredicted RBP9.66□□□□□ -0.86
COL12A1-202ENST00000345356 IGF2BP2-AS1Q96M15 143 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 HIGD1BQ9P298 99 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 ABCA7Q8IZY2 2146 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
COL12A1-202ENST00000345356 TRGV4A0A0C4DH28 118 aa9.65□□□□□ -0.86
COL12A1-202ENST00000345356 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
COL12A1-202ENST00000345356 H3BRN7 92 aa9.65□□□□□ -0.86
COL12A1-202ENST00000345356 RBMY1FQ15415 496 aaKnown RBP9.65□□□□□ -0.86
COL12A1-202ENST00000345356 C17orf82Q86X59 251 aaPredicted RBP9.65□□□□□ -0.86
COL12A1-202ENST00000345356 THAP8Q8NA92 274 aa9.65□□□□□ -0.86
COL12A1-202ENST00000345356 ZNF134P52741 427 aa9.65□□□□□ -0.87
COL12A1-202ENST00000345356 YPEL4Q96NS1 127 aa9.65□□□□□ -0.87
COL12A1-202ENST00000345356 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
COL12A1-202ENST00000345356 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
COL12A1-202ENST00000345356 TRBV7-1A0A0A6YYK4 115 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 C15orf65H3BRN8 121 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 RBM3P98179 157 aaKnown RBP9.64□□□□□ -0.87
COL12A1-202ENST00000345356 ZNF493Q6ZR52 646 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 SHISA9B4DS77 424 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 CR1LQ2VPA4 569 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 STHQ8IWL8 128 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 C2orf70A6NJV1 201 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 HAMPP81172 84 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 Q0VFX4 171 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 C20orf78Q9BR46 151 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 TSC2P49815 1807 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 ACYP1P07311 99 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 GATA1P15976 413 aaPredicted RBP9.64□□□□□ -0.87
COL12A1-202ENST00000345356 POU2AF1Q16633 256 aa9.64□□□□□ -0.87
COL12A1-202ENST00000345356 INTS1Q8N201 2190 aaKnown RBP9.64□□□□□ -0.87
COL12A1-202ENST00000345356 K7EM74 188 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 ABCA1O95477 2261 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 DKK1O94907 266 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 ZNF833PQ6ZTB9 187 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 PI4KAP42356 2102 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 C17orf58Q2M2W7 97 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 PLXND1Q9Y4D7 1925 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 I3L3M4 83 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 ATP5J2P56134 94 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 WNK2Q9Y3S1 2297 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 PLXNA3P51805 1871 aa9.63□□□□□ -0.87
COL12A1-202ENST00000345356 TINCRA0A1B0GVN0 87 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 LYPD2Q6UXB3 125 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 C17orf77Q96MU5 243 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 ATP6V0E2Q8NHE4 81 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 TRAV12-1A0A0B4J245 112 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 EGR2P11161 476 aaPredicted RBP9.62□□□□□ -0.87
COL12A1-202ENST00000345356 ZNF415Q09FC8 603 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 Q6ZR03 302 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 PTH2Q96A98 100 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 TP73-AS1Q9UF72 201 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 SHANK1Q9Y566 2161 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 VMO1Q7Z5L0 202 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 TPSG1Q9NRR2 321 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 PEMTQ9UBM1 199 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 Q6ZUT4 128 aa9.62□□□□□ -0.87
COL12A1-202ENST00000345356 DOCK10Q96BY6 2186 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 TMEM219Q86XT9 240 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 MT-ATP8P03928 68 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.61□□□□□ -0.87
COL12A1-202ENST00000345356 IGHV3-53P01767 116 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 ZNF503-AS2A6NEH8 195 aa9.61□□□□□ -0.87
COL12A1-202ENST00000345356 BAALC-AS2P0C853 105 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms