RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
CLK3-201ENST00000345005 C19orf71A6NCJ1 209 aa10□□□□□ -0.81
CLK3-201ENST00000345005 CHEK1O14757 476 aa10□□□□□ -0.81
CLK3-201ENST00000345005 LTAP01374 205 aa10□□□□□ -0.81
CLK3-201ENST00000345005 PYYP10082 97 aa10□□□□□ -0.81
CLK3-201ENST00000345005 LY6EQ16553 131 aa10□□□□□ -0.81
CLK3-201ENST00000345005 LCN12Q6JVE5 192 aa10□□□□□ -0.81
CLK3-201ENST00000345005 LINC00479Q96M42 142 aa10□□□□□ -0.81
CLK3-201ENST00000345005 HIGD1AQ9Y241 93 aa10□□□□□ -0.81
CLK3-201ENST00000345005 TRAV34A0A0B4J273 112 aa9.99□□□□□ -0.81
CLK3-201ENST00000345005 SH2D7A6NKC9 451 aaPredicted RBP9.99□□□□□ -0.81
CLK3-201ENST00000345005 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
CLK3-201ENST00000345005 HAX1O00165 279 aa9.99□□□□□ -0.81
CLK3-201ENST00000345005 FCGR2BP31994 310 aaPredicted RBP9.99□□□□□ -0.81
CLK3-201ENST00000345005 FOXA3P55318 350 aaPredicted RBP9.99□□□□□ -0.81
CLK3-201ENST00000345005 MORN5Q5VZ52 161 aa9.99□□□□□ -0.81
CLK3-201ENST00000345005 ATOH7Q8N100 152 aa9.99□□□□□ -0.81
CLK3-201ENST00000345005 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.98□□□□□ -0.81
CLK3-201ENST00000345005 TRAV41A0A0B4J266 112 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 G3V318 75 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 CD5LO43866 347 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 FSHBP01225 129 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 LYZP61626 148 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 PSG3Q16557 428 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 Q6AWC8 147 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 S100A7AQ86SG5 101 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 DEFB125Q8N687 156 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 DPF1Q92782 380 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 OTORQ9NRC9 128 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 CELSR1Q9NYQ6 3014 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 NPIPB6E9PJ23 425 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 RIGQ13278 110 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 DEFB112Q30KQ8 113 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 C9orf139Q6ZV77 190 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 SPATA12Q7Z6I5 190 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 TMEM14CQ9P0S9 112 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 S4R3C0 116 aa9.98□□□□□ -0.81
CLK3-201ENST00000345005 LOC102724200A0A096LPH7 203 aaPredicted RBP9.97□□□□□ -0.81
CLK3-201ENST00000345005 F8W735 103 aaPredicted RBP9.97□□□□□ -0.81
CLK3-201ENST00000345005 IGHG2P01859 326 aa9.97□□□□□ -0.81
CLK3-201ENST00000345005 TCRAP04437 139 aa9.97□□□□□ -0.81
CLK3-201ENST00000345005 IGF1P05019 195 aa9.97□□□□□ -0.81
CLK3-201ENST00000345005 BCL6BQ8N143 479 aaPredicted RBP9.97□□□□□ -0.81
CLK3-201ENST00000345005 RPH3ALQ9UNE2 315 aa9.97□□□□□ -0.81
CLK3-201ENST00000345005 AKAP9Q99996 3911 aa9.97□□□□□ -0.81
CLK3-201ENST00000345005 IGHV1-24A0A0C4DH33 117 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 WI2-2373I1.2A0A1W2PRP0 233 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 K7EQM0 130 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 HIST1H1AQ02539 215 aaPredicted RBP9.96□□□□□ -0.81
CLK3-201ENST00000345005 C15orf32Q32M92 178 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 PSMG4Q5JS54 123 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 ZNF491Q8N8L2 437 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 GATD1Q8NB37 220 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 SSBP4Q9BWG4 385 aaPredicted RBP9.96□□□□□ -0.81
CLK3-201ENST00000345005 ZANQ9Y493 2812 aa9.96□□□□□ -0.81
CLK3-201ENST00000345005 CSN1S1P47710 185 aa9.96□□□□□ -0.82
CLK3-201ENST00000345005 ZNF502Q8TBZ5 544 aa9.96□□□□□ -0.82
CLK3-201ENST00000345005 RNF125Q96EQ8 232 aa9.96□□□□□ -0.82
CLK3-201ENST00000345005 SLC25A39Q9BZJ4 359 aaPredicted RBP9.96□□□□□ -0.82
CLK3-201ENST00000345005 PEF1Q9UBV8 284 aaKnown RBP9.96□□□□□ -0.82
CLK3-201ENST00000345005 SVEP1Q4LDE5 3571 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 OR2T8A6NH00 312 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 TAX1BP3O14907 124 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 IGHV3-23P01764 117 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 IL4P05112 153 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 CTSGP08311 255 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 MAJINQ3KP22 176 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 LYPD1Q8N2G4 141 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 URB1-AS1Q96HZ7 61 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 Q9H3A6 140 aa9.95□□□□□ -0.82
CLK3-201ENST00000345005 TRBV7-1A0A0A6YYK4 115 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 FAM223BA6NKX1 122 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 BRI3O95415 125 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 NUDT3O95989 172 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 IGHV4-59P01825 116 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 SMIM17P0DL12 118 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 GP9P14770 177 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 GNG5P63218 68 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 SEC11AP67812 179 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 ATP5G2Q06055 141 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 BVES-AS1Q5T3Y7 98 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 C16orf54Q6UWD8 224 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 FAM223AQ8IWN6 122 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 TEX29Q8N6K0 151 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 WFDC11Q8NEX6 87 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 BLNKQ8WV28 456 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 EEF1AKMT3Q96AZ1 226 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 ATP6V0BQ99437 205 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 SHANK2-AS3Q9BTD1 123 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 SCRT2Q9NQ03 307 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 ITPR3Q14573 2671 aa9.94□□□□□ -0.82
CLK3-201ENST00000345005 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 GAGE12BA1L429 117 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 H3BUA1 57 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 S100A7P31151 101 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 BLCAPP62952 87 aa9.93□□□□□ -0.82
CLK3-201ENST00000345005 LINC01545Q5VT33 79 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms