RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 SHANK2-AS3Q9BTD1 123 aa6.78□□□□□ -1.32
MCPH1-201ENST00000344683 U3KQE9 123 aa6.78□□□□□ -1.32
MCPH1-201ENST00000344683 TEX48A0A1B0GUV7 120 aa6.77□□□□□ -1.32
MCPH1-201ENST00000344683 FAM240AA0A1B0GVK7 77 aa6.77□□□□□ -1.32
MCPH1-201ENST00000344683 Q8TAT8 98 aa6.77□□□□□ -1.32
MCPH1-201ENST00000344683 NDUFB1O75438 58 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 UBE2BP63146 152 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 ZCCHC24Q8N2G6 241 aaKnown RBP6.77□□□□□ -1.33
MCPH1-201ENST00000344683 IGKV1-9A0A0C4DH69 117 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 PRSS29PA6NIE9 313 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 CSRP3P50461 194 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 V9GYV3 84 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 IGKV1D-43A0A0B4J1Z2 117 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 H0YJW9 148 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 GFI1Q99684 422 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 TET1Q8NFU7 2136 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 C8orf86Q6ZUL3 223 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 C14orf132Q9NPU4 83 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 MRPL35Q9NZE8 188 aaKnown RBP6.77□□□□□ -1.33
MCPH1-201ENST00000344683 IGHV1-3A0A0C4DH29 117 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 NDUFC2-KCTD14E9PQ53 114 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 M0R1W7 72 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 PRB3Q04118 309 aaPredicted RBP6.77□□□□□ -1.33
MCPH1-201ENST00000344683 JMJD7-PLA2G4BH0Y9G9 81 aa6.77□□□□□ -1.33
MCPH1-201ENST00000344683 WIPF2Q8TF74 440 aaPredicted RBP6.76□□□□□ -1.33
MCPH1-201ENST00000344683 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 DSCR9P59020 149 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 LINC00527Q9UJ94 153 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 C4orf51C9J302 202 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 IGKV1-5P01602 117 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 K7ERS5 55 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 FREM1Q5H8C1 2179 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 NDUFS7O75251 213 aa6.76□□□□□ -1.33
MCPH1-201ENST00000344683 DAZ1Q9NQZ3 744 aaKnown RBP6.76□□□□□ -1.33
MCPH1-201ENST00000344683 SAP30O75446 220 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 CELA3BP08861 270 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 TMEM14CQ9P0S9 112 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 IGLV3-32A0A0A0MS00 114 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 PRR19A6NJB7 356 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 IGHV1-8P0DP01 117 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 FOXI1Q12951 378 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 C5orf64Q2M2E5 130 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 C1orf53Q5VUE5 145 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 TMEM200BQ69YZ2 307 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 C8orf49Q96NF6 230 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 AMTNQ6UX39 209 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 RNASE6Q93091 150 aaKnown RBP6.75□□□□□ -1.33
MCPH1-201ENST00000344683 SDHAF1A6NFY7 115 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 C9JQL5 133 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 Q71RC1 249 aaPredicted RBP6.75□□□□□ -1.33
MCPH1-201ENST00000344683 VSIG2Q96IQ7 327 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 SPTA1P02549 2419 aa6.75□□□□□ -1.33
MCPH1-201ENST00000344683 IGKV1D-8A0A087WSZ0 117 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 UQCRQO14949 82 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 FAM201AQ5SY85 155 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 SIGLEC9Q9Y336 463 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 BUB1B-PAK6H3BSN5 160 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 IGHV3-53P01767 116 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 PDE6GP18545 87 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 SMRP1Q8NCR6 262 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 LINC01560Q8TB33 94 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TCF20Q9UGU0 1960 aaKnown RBP6.74□□□□□ -1.33
MCPH1-201ENST00000344683 CR1LQ2VPA4 569 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 VMO1Q7Z5L0 202 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 SLC25A29Q8N8R3 303 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TNS1Q9HBL0 1735 aaKnown RBP6.74□□□□□ -1.33
MCPH1-201ENST00000344683 PLXNB1O43157 2135 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TMEM213A2RRL7 107 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TMEM256-PLSCR3K7ERE1 68 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 MST1LQ2TV78 715 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 TRAV26-1A0A087WT03 109 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 A0A1B0GUS0 222 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 C22orf46C9J442 243 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 ZNF134P52741 427 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 NREPQ16612 68 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 ZFP2Q6ZN57 461 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 ALPK3Q96L96 1907 aa6.74□□□□□ -1.33
MCPH1-201ENST00000344683 SRRM5B3KS81 715 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 CRYGCP07315 174 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 C3orf36Q3SXR2 165 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 HIGD2BQ4VC39 106 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 NDUFC1O43677 76 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 PNRC2Q9NPJ4 139 aaKnown RBP6.73□□□□□ -1.33
MCPH1-201ENST00000344683 HIGD1BQ9P298 99 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 NDPQ00604 133 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 RPL35AP18077 110 aaKnown RBP6.73□□□□□ -1.33
MCPH1-201ENST00000344683 LTBRP36941 435 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 DEFB104AQ8WTQ1 72 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 CENPFP49454 3210 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 PLXNA4Q9HCM2 1894 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 IGLL5B9A064 214 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 IGLC1P0CG04 106 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 SH2D6Q7Z4S9 175 aa6.73□□□□□ -1.33
MCPH1-201ENST00000344683 E9PQ18 207 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms