RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 AGPAT4-IT1Q9H0P7 198 aa14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 NOP10Q9NPE3 64 aaKnown RBP14.12□□□□□ -0.15
CEACAM3-201ENST00000344550 TRAV12-3A0A0B4J271 114 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 C7orf71A4D174 169 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 RBAKDNA6NC62 111 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 SNURFLB1AK76 121 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 KHDC3LQ587J8 217 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 FFAR4Q5NUL3 377 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 TMEM78Q5T7P6 136 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 EXOC3-AS1Q8N2X6 119 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 ZNF680Q8NEM1 530 aa14.11□□□□□ -0.15
CEACAM3-201ENST00000344550 FRAS1Q86XX4 4008 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 F5H768 121 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 OR7C2O60412 319 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 CSN1S1P47710 185 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 ANXA2RQ3ZCQ2 193 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 ARL6IP6Q8N6S5 226 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 ZNF503Q96F45 646 aa14.1□□□□□ -0.15
CEACAM3-201ENST00000344550 ZNF324O75467 553 aaPredicted RBP14.09□□□□□ -0.15
CEACAM3-201ENST00000344550 FCN2Q15485 313 aa14.09□□□□□ -0.15
CEACAM3-201ENST00000344550 C18orf15Q96N68 181 aa14.09□□□□□ -0.15
CEACAM3-201ENST00000344550 ZNF492Q9P255 531 aa14.09□□□□□ -0.15
CEACAM3-201ENST00000344550 ALG5Q9Y673 324 aa14.09□□□□□ -0.15
CEACAM3-201ENST00000344550 GPX1P07203 203 aa14.08□□□□□ -0.16
CEACAM3-201ENST00000344550 PRB4P10163 310 aaPredicted RBP14.08□□□□□ -0.16
CEACAM3-201ENST00000344550 ERCC8Q13216 396 aa14.08□□□□□ -0.16
CEACAM3-201ENST00000344550 RXFP4Q8TDU9 374 aa14.08□□□□□ -0.16
CEACAM3-201ENST00000344550 LENEPQ9Y5L5 61 aa14.08□□□□□ -0.16
CEACAM3-201ENST00000344550 H3BNG1 76 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 OR10J4P0C629 311 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 M6PRP20645 277 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 ZNF138P52744 262 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 UBE2L3P68036 154 aaKnown RBP14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 ZNF266Q14584 549 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 ACOT6Q3I5F7 207 aaPredicted RBP14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 FAM122CQ6P4D5 195 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 PQLC2Q6ZP29 291 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 EIF4E3Q8N5X7 224 aaKnown RBP14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 DNAH10Q8IVF4 4471 aa14.07□□□□□ -0.16
CEACAM3-201ENST00000344550 IBA57Q5T440 356 aaKnown RBP14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 Q6ZR54 194 aa14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 ZFAND2AQ8N6M9 145 aa14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 TMED6Q8WW62 240 aa14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 SMIM3Q9BZL3 60 aa14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 MED28Q9H204 178 aa14.06□□□□□ -0.16
CEACAM3-201ENST00000344550 J3KRW8 73 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 CCL18P55774 89 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 RANP62826 216 aaKnown RBP14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 FAM74A1Q5RGS3 127 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 PHYHIPLQ96FC7 376 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 AQP10Q96PS8 301 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 VGLL1Q99990 258 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 ATG101Q9BSB4 218 aa14.05□□□□□ -0.16
CEACAM3-201ENST00000344550 IGKV2-40A0A087WW87 121 aaPredicted RBP14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 A0A1W2PPV4 95 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 IGKV2D-40P01614 121 aaPredicted RBP14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 RNASE4P34096 147 aaKnown RBP14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 CD300CQ08708 224 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 SOHLH1Q5JUK2 328 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 Q9H3A6 140 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 WFDC1Q9HC57 220 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
CEACAM3-201ENST00000344550 BTN1A1Q13410 526 aa14.03□□□□□ -0.16
CEACAM3-201ENST00000344550 C11orf72Q8NBR9 251 aa14.03□□□□□ -0.16
CEACAM3-201ENST00000344550 OR2G3Q8NGZ4 309 aa14.03□□□□□ -0.16
CEACAM3-201ENST00000344550 PSMG3Q9BT73 122 aaPredicted RBP14.03□□□□□ -0.16
CEACAM3-201ENST00000344550 GIPP09681 153 aaPredicted RBP14.02□□□□□ -0.17
CEACAM3-201ENST00000344550 TCL1AP56279 114 aa14.02□□□□□ -0.17
CEACAM3-201ENST00000344550 SERF2P84101 59 aa14.02□□□□□ -0.17
CEACAM3-201ENST00000344550 GAGE12BA1L429 117 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 DIRC3C9JPN6 131 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 RGS13O14921 159 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GAGE7O76087 117 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 NUDT3O95989 172 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 MBP02144 154 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GAGE12FP0CL80 117 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GAGE12GP0CL81 117 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GAGE12IP0CL82 117 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GNPNAT1Q96EK6 184 aaPredicted RBP14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 GSN-AS1Q9NRJ2 163 aa14.01□□□□□ -0.17
CEACAM3-201ENST00000344550 IGHV1OR15-1A0A075B7D0 117 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 OR5I1Q13606 314 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 OR10G4Q8NGN3 311 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 OR10G9Q8NGN4 311 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 OR10G7Q8NGN6 311 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 CMTM2Q8TAZ6 248 aa14□□□□□ -0.17
CEACAM3-201ENST00000344550 M0R2N4 97 aa13.99□□□□□ -0.17
CEACAM3-201ENST00000344550 SPINK4O60575 86 aa13.99□□□□□ -0.17
CEACAM3-201ENST00000344550 Q6ZTI0 123 aa13.99□□□□□ -0.17
CEACAM3-201ENST00000344550 TRGV2A0A075B6R0 118 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 TRAV26-1A0A087WT03 109 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 SERTM2A0A1B0GWG4 89 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 RTL8CO15255 209 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 Q6AWC8 147 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 INO80EQ8NBZ0 244 aaPredicted RBP13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 ARPC5LQ9BPX5 153 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 TP53TG3Q9ULZ0 132 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 NACAE9PAV3 2078 aa13.98□□□□□ -0.17
CEACAM3-201ENST00000344550 HECTD4Q9Y4D8 3996 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms