RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
HOXA1-201ENST00000343060 MRPL35Q9NZE8 188 aaKnown RBP7.52□□□□□ -1.21
HOXA1-201ENST00000343060 A0A087WX48 190 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 IGHG4P01861 327 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 CKS1BP61024 79 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 ZNF672Q499Z4 452 aaPredicted RBP7.51□□□□□ -1.21
HOXA1-201ENST00000343060 GFRALQ6UXV0 394 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 TRAV40A0A0B4J280 105 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 SPAARA0A1B0GVQ0 90 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 F8W735 103 aaPredicted RBP7.51□□□□□ -1.21
HOXA1-201ENST00000343060 CDX4O14627 284 aaPredicted RBP7.51□□□□□ -1.21
HOXA1-201ENST00000343060 RPL7P18124 248 aaKnown RBP7.51□□□□□ -1.21
HOXA1-201ENST00000343060 PLNP26678 52 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 TMEM108Q6UXF1 575 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 IL17RELQ6ZVW7 336 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 Q8TAT8 98 aa7.51□□□□□ -1.21
HOXA1-201ENST00000343060 LY6LH3BQJ8 138 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 FAM27E3Q08E93 113 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 TRAV12-1A0A0B4J245 112 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 K7EMI3 77 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 GATA1P15976 413 aaPredicted RBP7.5□□□□□ -1.21
HOXA1-201ENST00000343060 INSL3P51460 131 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 KLRD1Q13241 179 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 SCGB2A2Q13296 93 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 MORN3Q6PF18 240 aaPredicted RBP7.5□□□□□ -1.21
HOXA1-201ENST00000343060 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 DTX2Q86UW9 622 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 NRACQ8N912 160 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 IGFBPL1Q8WX77 278 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 CCL17Q92583 94 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 C1QTNF4Q9BXJ3 329 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 TMEM160Q9NX00 188 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 AGRNO00468 2067 aa7.5□□□□□ -1.21
HOXA1-201ENST00000343060 IGLV11-55A0A075B6I3 123 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 FABP5P3A8MUU1 101 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 HIST1H4GQ99525 98 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 CDIP1Q9H305 208 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 MRPL16Q9NX20 251 aaKnown RBP7.49□□□□□ -1.21
HOXA1-201ENST00000343060 LAGE3Q14657 143 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 CFAP126Q5VTH2 177 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 MYOZ3Q8TDC0 251 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 FANCD2OSQ96PS1 177 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 SMAD5-AS1Q9Y6J3 95 aa7.49□□□□□ -1.21
HOXA1-201ENST00000343060 SPENQ96T58 3664 aaKnown RBP7.49□□□□□ -1.21
HOXA1-201ENST00000343060 NCBP2LA6PVI3 153 aaKnown RBP7.48□□□□□ -1.21
HOXA1-201ENST00000343060 NDUFA3O95167 84 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 MFAP4P55083 255 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 ATP5G2Q06055 141 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 FOXI1Q12951 378 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 WFDC12Q8WWY7 111 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 RPEQ96AT9 228 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 MYMXA0A1B0GTQ4 84 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 RBAKDNA6NC62 111 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 F8VRH5 84 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 CNIH1O95406 144 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 APOMO95445 188 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 ORM1P02763 201 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 SMCPP49901 116 aaPredicted RBP7.48□□□□□ -1.21
HOXA1-201ENST00000343060 C8orf86Q6ZUL3 223 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 MTURNQ8N3F0 131 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 ZNF418Q8TF45 676 aaPredicted RBP7.48□□□□□ -1.21
HOXA1-201ENST00000343060 PRO3102Q9H379 93 aa7.48□□□□□ -1.21
HOXA1-201ENST00000343060 TRAV26-1A0A087WT03 109 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 DLX1P56177 255 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 NPBQ8NG41 125 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 C20orf78Q9BR46 151 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 PRRC2CQ9Y520 2896 aaKnown RBP7.47□□□□□ -1.21
HOXA1-201ENST00000343060 IGHV4-4A0A075B6R2 117 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 H7C1H1 209 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 NBR2O15453 112 aa7.47□□□□□ -1.21
HOXA1-201ENST00000343060 RALYQ9UKM9 306 aaKnown RBP7.47□□□□□ -1.21
HOXA1-201ENST00000343060 TRGV3P03979 118 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 CRYBA4P53673 196 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 BSPH1Q075Z2 132 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 DYNAPQ8N1N2 210 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 CFHR4Q92496 578 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 DLX4Q92988 240 aaPredicted RBP7.46□□□□□ -1.21
HOXA1-201ENST00000343060 RNASE6Q93091 150 aaKnown RBP7.46□□□□□ -1.21
HOXA1-201ENST00000343060 CYSLTR1Q9Y271 337 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 ZDBF2Q9HCK1 2354 aa7.46□□□□□ -1.21
HOXA1-201ENST00000343060 IGKV3D-20A0A0C4DH25 116 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 IGHV7-4-1A0A0J9YVY3 117 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 OR11H12B2RN74 326 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 TIMM23O14925 209 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 SLC25A16P16260 332 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 HLA-DMBP28068 263 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 UBE2D1P51668 147 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 OR11H1Q8NG94 326 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 OR11H2Q8NH07 326 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 GEMIN7Q9H840 131 aaKnown RBP7.46□□□□□ -1.22
HOXA1-201ENST00000343060 C21orf62Q9NYP8 219 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 GPR179Q6PRD1 2367 aa7.46□□□□□ -1.22
HOXA1-201ENST00000343060 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
HOXA1-201ENST00000343060 FHL3Q13643 280 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 SH3BGRL2Q9UJC5 107 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 S4R3C0 116 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 HOXA3O43365 443 aaPredicted RBP7.45□□□□□ -1.22
HOXA1-201ENST00000343060 COX7A1P24310 79 aa7.45□□□□□ -1.22
HOXA1-201ENST00000343060 UBE2D3P61077 147 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms