RNA–Protein interactions for RNA: ENST00000340630.9

IFT27-201, Transcript of intraflagellar transport 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFT27, Length 1,113 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-201ENST00000340630 C15orf53Q8NAA6 179 aa12.7□□□□□ -0.38
IFT27-201ENST00000340630 SEC11CQ9BY50 192 aa12.7□□□□□ -0.38
IFT27-201ENST00000340630 ACTR3CQ9C0K3 210 aaPredicted RBP12.7□□□□□ -0.38
IFT27-201ENST00000340630 SLC25A22Q9H936 323 aa12.7□□□□□ -0.38
IFT27-201ENST00000340630 PXMP4Q9Y6I8 212 aa12.7□□□□□ -0.38
IFT27-201ENST00000340630 NACAE9PAV3 2078 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 RBFOX3A6NFN3 312 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 SOCS3O14543 225 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 APOC3P02656 99 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 RPL29P47914 159 aaKnown RBP12.69□□□□□ -0.38
IFT27-201ENST00000340630 ZNF506Q5JVG8 444 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 SPATA31B1PQ5VZV4 182 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 TMEM208Q9BTX3 173 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 EIF5A2Q9GZV4 153 aaKnown RBP12.69□□□□□ -0.38
IFT27-201ENST00000340630 SMDT1Q9H4I9 107 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 SLC39A9Q9NUM3 307 aa12.69□□□□□ -0.38
IFT27-201ENST00000340630 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 NBDYA0A0U1RRE5 68 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 F8W036 122 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 SCO1O75880 301 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
IFT27-201ENST00000340630 RAB31Q13636 194 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 ICAM4Q14773 271 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 C6orf223Q8N319 242 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 SLC35E1Q96K37 410 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 SLC45A2Q9UMX9 530 aa12.68□□□□□ -0.38
IFT27-201ENST00000340630 A0A0J9YX75 114 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 ZFP92A6NM28 416 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 LINC00869P0C866 280 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 CDC34P49427 236 aaPredicted RBP12.67□□□□□ -0.38
IFT27-201ENST00000340630 LYZP61626 148 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 B2MP61769 119 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 ZNF90Q03938 601 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 GCSAMLQ5JQS6 135 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 RAB24Q969Q5 203 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 HERC1Q15751 4861 aa12.67□□□□□ -0.38
IFT27-201ENST00000340630 ISLRO14498 428 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 EIF3GO75821 320 aaKnown RBP eCLIP12.66□□□□□ -0.38
IFT27-201ENST00000340630 PRM2P04554 102 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 PPT1P50897 306 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 KHDC3LQ587J8 217 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 OR8I2Q8N0Y5 310 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 THAP8Q8NA92 274 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 ZNRF2Q8NHG8 242 aa12.66□□□□□ -0.38
IFT27-201ENST00000340630 IGKV1D-37A0A075B6S9 117 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 ZNF705GA8MUZ8 300 aaPredicted RBP12.65□□□□□ -0.38
IFT27-201ENST00000340630 NUDT3O95989 172 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 SRP19P09132 144 aaKnown RBP12.65□□□□□ -0.38
IFT27-201ENST00000340630 DEFB130BP0DP73 79 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 DEFB130AP0DP74 79 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 BCL2P10415 239 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 C16orf92Q96LL3 132 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 DOK5Q9P104 306 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 GNG13Q9P2W3 67 aa12.65□□□□□ -0.38
IFT27-201ENST00000340630 F5H768 121 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 HMGB3O15347 200 aaKnown RBP12.64□□□□□ -0.39
IFT27-201ENST00000340630 CYP2G1PQ6ZSU1 146 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 Q8N1X5 172 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 SVBPQ8N300 66 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 RXFP4Q8TDU9 374 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 SCRT2Q9NQ03 307 aa12.64□□□□□ -0.39
IFT27-201ENST00000340630 LYRM9A8MSI8 78 aa12.63□□□□□ -0.39
IFT27-201ENST00000340630 IFNA1P01562 189 aa12.63□□□□□ -0.39
IFT27-201ENST00000340630 A0A1W2PPV4 95 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 FABP1P07148 127 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 STAG3L2P0CL84 134 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 STAG3L3P0CL85 134 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 CCL18P55774 89 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 SAMD13Q5VXD3 122 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 SPATA12Q7Z6I5 190 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 VAX2Q9UIW0 290 aa12.62□□□□□ -0.39
IFT27-201ENST00000340630 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
IFT27-201ENST00000340630 RHOBP62745 196 aa12.61□□□□□ -0.39
IFT27-201ENST00000340630 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
IFT27-201ENST00000340630 NKX6-2Q9C056 277 aaPredicted RBP12.61□□□□□ -0.39
IFT27-201ENST00000340630 MANBALQ9NQG1 85 aa12.61□□□□□ -0.39
IFT27-201ENST00000340630 LINC00588Q9Y4M8 146 aa12.61□□□□□ -0.39
IFT27-201ENST00000340630 A8MTW9 85 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 M0R2Z0 102 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 SNAPINO95295 136 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 OR5G3P0C626 314 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 GATA2P23769 480 aaPredicted RBP12.6□□□□□ -0.39
IFT27-201ENST00000340630 TAGLN2P37802 199 aaKnown RBP12.6□□□□□ -0.39
IFT27-201ENST00000340630 GALR1P47211 349 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 MEOX2P50222 304 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 TRGV9Q99603 122 aa12.6□□□□□ -0.39
IFT27-201ENST00000340630 CRXO43186 299 aaPredicted RBP12.59□□□□□ -0.39
IFT27-201ENST00000340630 INSP01308 110 aa12.59□□□□□ -0.39
IFT27-201ENST00000340630 AZU1P20160 251 aa12.59□□□□□ -0.39
IFT27-201ENST00000340630 CNN1P51911 297 aaKnown RBP12.59□□□□□ -0.39
IFT27-201ENST00000340630 SELENOTP62341 195 aa12.59□□□□□ -0.39
IFT27-201ENST00000340630 CYB561D1Q8N8Q1 229 aa12.59□□□□□ -0.39
IFT27-201ENST00000340630 DUSP14O95147 198 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms